Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01799 ATGTCAGCGGAAGCGTCTAAGCGCCACCAATGGCAGTGGGAGAACGCCACTGCCGGCGCCGCTGCTGGATTCGCCACCGTCGCTGTTATGCACCCCCTTGATGTTGTTCGAACTAGGTTCCAAGTTAACGACGGTCGAGTCTCGCATCTTCCCAGTTACAAGAACACTGCACACGCCGTTTTCACCATTGCTCGCTCCGAGGAGATTGCCCTAAGTCATTTGTTTGAGCTCATGGCTTTTGCTAGCATATCGTGGTTCGTGAAGTATGCCACTTGTTATGATTTTCGTATGTCCTTATTCCTTAAGAAAGAAAAGTATCCTGATAGAATGATTGCCGAACCTTCTAGTGCAACAGAGGCAGTACGTGGCAAGGTTGTTTGTTGCCCACTTTTGGCCCAACAGGCAAGGTGGTTGTGGGGGTGGGGGAATCATGAGTCAATGTTTTTGGTTAATGGATGGTTGCTTTTGTCATTAGACGTCATCTTTCATCTTGTCCATGGTCTTACTTTCACAAATATGATCACTGTTGCACTTGCAGTTAAGACCAATAGTAAGGCTCAATGTTCTTCCATCCACATATTATTCATTGGTTTGGGATTAAGAGGCTTATATGCAGGCTTTCTTCCGGGGGTTCTTGGGTCTACCATTTCGTGGGGTTTATATTTCTTTTTTTATGACAAAGCCAAACAAAGATATGCAAGGAACAGGGAGGGGAAGTTGAGCCCAGGTCTTCATCTTGCCTCAGCTGCTGAAGCAGGAGGTTTCCTTGTGCACAAATCCTGTCTGGCTAGTAAAAACGAGATTGCAGCTTCAAACTCCACTTCATCAGACACGACCATACTCTGGGATTTATGTGCACTTTACAGAGGGATTGTTCCTGGTCTATTTCTGGTTTCTCATGGTGCTATTCAGTTCACAGCATATGAGGAACTACGTAAAGTTATTGTTGATTTTAAGAGTAAGAGAAGTACAGTACATAATCAAAACCCAGATAAATTGCTGAATTCTGTTGATTATGCTGTTCTTGGAGCAACATCAAAACTTGCTGCGATACTGCTAACTTATCCATTTCAGGTTATGCGAGCCCGATTGCAGCAACGGCCTAGTGGTGATGGTGTTCCAAGATATATGGACACTTGGCATGTTGTGAAAGAAACTGCACGATTTGAAGGTATCCGAGGTTATTACAGAGGAATTACCGCAAACCTGTTGAAGAATGCTCCTGCTTCTTCAATAACATTTATTGTGTATGAAAACGTTCTAAAATTGCTTAAACCGACTACAAGGAATGACTGA 1296 0.439 MSAEASKRHQWQWENATAGAAAGFATVAVMHPLDVVRTRFQVNDGRVSHLPSYKNTAHAVFTIARSEEIALSHLFELMAFASISWFVKYATCYDFRMSLFLKKEKYPDRMIAEPSSATEAVRGKVVCCPLLAQQARWLWGWGNHESMFLVNGWLLLSLDVIFHLVHGLTFTNMITVALAVKTNSKAQCSSIHILFIGLGLRGLYAGFLPGVLGSTISWGLYFFFYDKAKQRYARNREGKLSPGLHLASAAEAGGFLVHKSCLASKNEIAASNSTSSDTTILWDLCALYRGIVPGLFLVSHGAIQFTAYEELRKVIVDFKSKRSTVHNQNPDKLLNSVDYAVLGATSKLAAILLTYPFQVMRARLQQRPSGDGVPRYMDTWHVVKETARFEGIRGYYRGITANLLKNAPASSITFIVYENVLKLLKPTTRND 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01799 431 Gene3D Mitochondrial carrier domain 1 133 IPR023395 -
Vian1g01799 431 SUPERFAMILY Mitochondrial carrier 199 419 IPR023395 -
Vian1g01799 431 ProSiteProfiles Solute carrier (Solcar) repeat profile. 334 423 IPR018108 -
Vian1g01799 431 Gene3D Mitochondrial carrier domain 282 430 IPR023395 -
Vian1g01799 431 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 12 426 IPR044712 GO:0006862|GO:0055085
Vian1g01799 431 Pfam Mitochondrial carrier protein 337 425 IPR018108 -
Vian1g01799 431 Pfam Mitochondrial carrier protein 11 69 IPR018108 -
Vian1g01799 431 Pfam Mitochondrial carrier protein 199 235 IPR018108 -
Vian1g01799 431 FunFam Folate transporter 1, chloroplastic 276 429 - -
Vian1g01799 431 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 99 IPR018108 -
Vian1g01799 431 Gene3D Mitochondrial carrier domain 172 264 IPR023395 -
Vian1g01799 431 SUPERFAMILY Mitochondrial carrier 10 104 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01799 Vian-Chr1 21190586 21197955 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01799 190 424 Chloroplast and Mitochondria Gene Families AT2G47490 32.046 2.76e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01799 K15115 - gmx:100809599 367.466