Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01797 ATGGCCACTTCCATGAGCTTTTTCTTGCTTCTTTCTTTGCTAGCCTTTGCTCCCTTGTGTTTCTGTAACTACTACCAAGAGGGTAAACTCTACCCTCAGTTTTATGACTATTCATGCCCACAAGCTCAGAATATCGTCAAGTCCATCCTTGCCAAGTATGTTCAACAGCAACCCCGATTGCCAGCTTCTATTCTCAGGCTTCATTTCCATGATTGCTTTGTCAAGGGTTGTGATGCTTCGTTGCTGTTAGATAGCAGTGAGAGCATCATCAGTGAGAAGGGATCAAACCCAAACCGTAATTCAGCCAGAGGATTTGAAGTCATTGATGCAATTAAAGCTGCATTAGAGAGAGAATGCCCTTCTACAGTTTCTTGTGCTGACATCTTGACTCTAGCTGCAAGAGATTCAGTTGTTCTTAGTGGTGGACCAAGCTGGGAAGTACCTTTAGGAAGAAGGGACTCTAGAGATGCAAGCATAAGTGGCTCCAACAACAACATTCCAGCCCCAAATAACACATTTCAGACCATTCTTACAAAATTCCGGCTTCATGGACTTGACCTTGTTGATCTAGTTGCTCTATCTGGGGGTCATACCATAGGAAATGCCAGATGCACCACCTTCAGGCAAAGACTCTATAGCCAAATCAGTGGCAATGGCAAGCCAGATTCCACTCTTGACCAATACTATGCTGCTGCATTGCGCAATAGGTGTCCAAGATCTGGGGGTGACCAGAACCTGTTCTTCCTAGACTATGCCACCCCATATAAATTTGACAACACCTACTTCAAGAACCTTTTGGCTTACAAGGGTCTCTTGAGTTCTGACCAAATCCTTCTCACAGACCAAGAATCAGCTGAACTAGTGAAGTCCTATGCTGAAAGTAATGACATTTTCTTTGAACAGTTCGCCAAGTCCATGATCAAGATGGGGAACATATCTCCTCTGACAAATTCAAGGGGAGAGATCAGAGAGAACTGCCGGAAGATCAACGCTTGA 996 0.4438 MATSMSFFLLLSLLAFAPLCFCNYYQEGKLYPQFYDYSCPQAQNIVKSILAKYVQQQPRLPASILRLHFHDCFVKGCDASLLLDSSESIISEKGSNPNRNSARGFEVIDAIKAALERECPSTVSCADILTLAARDSVVLSGGPSWEVPLGRRDSRDASISGSNNNIPAPNNTFQTILTKFRLHGLDLVDLVALSGGHTIGNARCTTFRQRLYSQISGNGKPDSTLDQYYAAALRNRCPRSGGDQNLFFLDYATPYKFDNTYFKNLLAYKGLLSSDQILLTDQESAELVKSYAESNDIFFEQFAKSMIKMGNISPLTNSRGEIRENCRKINA 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01797 331 FunFam Peroxidase 33 175 - -
Vian1g01797 331 CDD secretory_peroxidase 29 329 IPR033905 GO:0004601|GO:0042744
Vian1g01797 331 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian1g01797 331 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian1g01797 331 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian1g01797 331 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian1g01797 331 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian1g01797 331 PANTHER PEROXIDASE 72-RELATED 29 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g01797 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Vian1g01797 331 FunFam Peroxidase 167 309 - -
Vian1g01797 331 ProSiteProfiles Plant heme peroxidase family profile. 29 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian1g01797 331 Gene3D - 34 330 - -
Vian1g01797 331 SUPERFAMILY Heme-dependent peroxidases 30 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vian1g01797 331 Gene3D Peroxidase, domain 2 167 310 - -
Vian1g01797 331 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g01797 331 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g01797 331 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g01797 331 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g01797 331 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g01797 331 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g01797 331 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g01797 331 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g01797 331 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian1g01797 331 Pfam Peroxidase 47 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01797 Vian-Chr1 21177986 21179620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01797 1 330 Peroxidase AT5G66390 72.754 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01797 K00430 - gmx:100777733 577.4