Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01794 ATGGAGTTTGCTAGTTTCCATCTTCAGCATCAGCTTCAAGAAGAATCTGCTCACTCTATAGCTTCAGCAACCCCACCACCTGACTCTAAACCTTCCATCACCTCTCATCAATCATGGATCCCAAGCAACATATACAATGGTTGTAACAGTGGCTTTCTAACTGATAGCTTTACAAATTCAAGAGAAGTACAGCACAAGCACGCCATGACTGACTCACTTAGAATTTCAACAAGGCAAGCCTTGGGTTTCCACAATGGAAAAAGCGTTGCTCAACAGCCAGTTAGTGATCTCTTTGCAGCAAGAATCAAAGGTGAAATGATGAACACCTCCATGAAGGCTATGGAGGAATCGTGTTCACTAATCCCAATTCATGAACCACGATATCCTCCTAGTTTATTACCTAGTCTTGGTGTAACTGGTGTAGAGTTTTTTCCTTCGGAGAATGTCTTTCATAATGAGAAGCCTATTGATGGAAAGACCTTAAGCAAGAGATATAACAACTTTGGTGATGCTAGTTTAATTTCGAATTTACCAACCCTAGATATGACCTCTTCTTTGGTTTCAAGTTCTTTGGGTTTAAATCCTAAAATGTTTGATTTGCATACAAGTTACAGTGAGAGTTGTGAAATCCAACCTTGCTATGATACTTTTGGTCTAAACGAGAGCATAGCTTTGTGCCACAGCGACATGCATGGCCGCGAAAATAGTCCATCAAATAGCTCAAAAACCAGTACAGCCTCTGTGTTAAGTGAAGCCATTGGCTACATCCATTTCCTTCACCAACAAATCCAGACTTTGAGCATTCCTTACATGAAATCCACGCAAAGCAATAGAATGGTGCAGCTGAGTACAAATAAAGTAGATAAAGAAGTGAAGCCAGACCTAAGAAGCAGAGGCTTGTGTCTTGTTCCCCTTTCTTACGCATCGTTTATTCATCGTTGTGTTTAG 948 0.4072 MEFASFHLQHQLQEESAHSIASATPPPDSKPSITSHQSWIPSNIYNGCNSGFLTDSFTNSREVQHKHAMTDSLRISTRQALGFHNGKSVAQQPVSDLFAARIKGEMMNTSMKAMEESCSLIPIHEPRYPPSLLPSLGVTGVEFFPSENVFHNEKPIDGKTLSKRYNNFGDASLISNLPTLDMTSSLVSSSLGLNPKMFDLHTSYSESCEIQPCYDTFGLNESIALCHSDMHGRENSPSNSSKTSTASVLSEAIGYIHFLHQQIQTLSIPYMKSTQSNRMVQLSTNKVDKEVKPDLRSRGLCLVPLSYASFIHRCV 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01794 315 CDD bHLH_AtbHLH_like 238 267 IPR045239 -
Vian1g01794 315 MobiDBLite consensus disorder prediction 14 36 - -
Vian1g01794 315 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 239 309 - -
Vian1g01794 315 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 237 274 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01794 Vian-Chr1 21129726 21132620 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01794 242 310 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 54.795 7.36e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01794 - - vum:124832810 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01794 1 21129726 21132620 Vian1g01794 1 21129726 21132620 ECH