Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01774 ATGGCATCATCTTGGACTCAGAGGCAGAACAAATTGTTCGAACAAGCCCTGGCTTTATACGACAGGGAAACCCCTGACAGATGGCAGAATGTTGCCAATGTGGTTGGAAGATCAGTCGAAGACGTCAAAAAGCACTACGAGATCCTCAAAGAAGATGTCAAACGCATTGAACATGGCCAAGTTCTTGAAGATCCAGAGACCACAAAGCATGAACAGCCATTAGCATTCTCTTGA 234 0.453 MASSWTQRQNKLFEQALALYDRETPDRWQNVANVVGRSVEDVKKHYEILKEDVKRIEHGQVLEDPETTKHEQPLAFS 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01774 77 Gene3D - 2 62 - -
Vian1g01774 77 CDD SANT 4 50 IPR001005 -
Vian1g01774 77 ProSiteProfiles SANT domain profile. 1 54 IPR017884 -
Vian1g01774 77 FunFam Transcription factor SRM1 1 62 - -
Vian1g01774 77 SUPERFAMILY Homeodomain-like 3 57 IPR009057 -
Vian1g01774 77 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 62 IPR044636 GO:0003700
Vian1g01774 77 SMART sant 1 52 IPR001005 -
Vian1g01774 77 MobiDBLite consensus disorder prediction 58 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01774 Vian-Chr1 20842416 20843476 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01774 - - pvu:PHAVU_003G254400g 124.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01774 1 20842416 20843476 Vian10g00710 10 6869797 6878412 ECH
Vian5g01497 5 37531088 37531369 Vian1g01774 1 20842416 20843476 ECH
Vian1g01774 1 20842416 20843476 Vian1g01774 1 20842416 20843476 ECH
Vian10g00710 10 6869797 6878412 Vian1g01774 1 20842416 20843476 ECH