Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01717 ATGTTCGACCTGCCGGATAAGTTTGGCAACTCGCCGGTGTCCCTGATCGTGCTGGCCAACAACCGCTTCCATGGCTGTGTGCCGGCTAGAATCGGCAACATGAAGGGGTTGAACGAGATTGTTCTGATGAACAATGCTTTCAGGTCGTGCTTCCCCGAGGAGATAGGGTTGCCGAAGAACTTGACGGTGTTCGATGTAAGCTTCAACCAGTTGTACTGCCCTCGTTCCCCTCCGCCCCCACCGTCGGTGTACTCGCCTCCACCACCAGTGTACTCGCGCCACCACCACCTCCAGTGTGCGAGGCAGAAGCTCGTGGTGATGGCCTCTTGCGGATGGCGATTTAGAGTTCGACGGGTTTCTTCGAATTGGGTATCTGTGTGTGTGATAGTTGTTGGTCCTCTGGTTTTTTCTAGAGTGCAGGTGGTGAGGATGGTGGCACGAAGCGTTAATGGAAGATGGCCATGGTTGCGCGTGAATGAAGAAGCGGCGCTGCTCATGGTGGTGGTCCGATGCGAGCTTGGAAGATGA 528 0.553 MFDLPDKFGNSPVSLIVLANNRFHGCVPARIGNMKGLNEIVLMNNAFRSCFPEEIGLPKNLTVFDVSFNQLYCPRSPPPPPSVYSPPPPVYSRHHHLQCARQKLVVMASCGWRFRVRRVSSNWVSVCVIVVGPLVFSRVQVVRMVARSVNGRWPWLRVNEEAALLMVVVRCELGR 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01717 175 Gene3D Ribonuclease Inhibitor 2 79 IPR032675 -
Vian1g01717 175 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 2 72 - -
Vian1g01717 175 SUPERFAMILY L domain-like 14 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01717 Vian-Chr1 19819153 19822858 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01717 2 74 Leucine-rich Repeat extension Gene Families AT4G13340 65.753 9.50e-27 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01717 - - gmx:106799218 129.028