Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01703 ATGGCTATGGTTCTGGATGCTGTTGTTGGACAAGTGCTTGATGAACTGCTGAGCACTGTTATTGCAATGAAAGACAGGGCAGTGAAGTTCAGAGCCACCCTGGAAAAGTTGCATTCCACCCTCGAAAAAGTAGAACCGAAGGCTAGGCAGATATATGCTCTTAACAAGCGATTGGATAAACCAGCTGAAGAATCGCAGAAGCTGATCGATGAGATGCAGAAGGGGAAGGAGCTTGTTATTGAGTGCTCCAAAGTTGATTGGTGGAATTGCTGTTATAAGGCCAGTTCCCAAGAGAAACTTCAAGACTTGATCGATTCTATTACTCTGTACTTTCAATTGGATATGCAAGGAAATATAAATGTCATTGTATTGGAGAACCAGCACCTGCTGAAGAAGCTTGTGGAGAGTGTTCCGAGAAGGATTGAAGGCTTGTGCTCTCCACCTGAACCCCCAGCTTTCACTGTTGGGCTGGATGTTCATTTGGGGGCGTTGAAGTTCAAGTTGCTGGAGAATCATCATGAGGGGTCGGTGCTCACGGTAACTGGAGCAGGAGGTTCGGGAAAGTCAACGTTGGCCAAGAAGTTTTGTTCTGATGAGGAAGTTAAAGGTAAATTCAAGGACAACATATTCTTCATCTCCTTAGTGGAATCGCCCAAGTTGAGCACCATAGTGGAGAGACTGTTTGAACACAATGGTTACGAGAAGCCACAGTTTCAAAGTGATGAGGGTGCAGTTTATCGATTGGAAAATTTGCTAAAACAGATTGGAAAACAATCCATATTATTGGTCCTGGACGGTGTTTTGCCAGAGTCAGCATCCCTAGTTGAGAAATTCGTGTTTCAGATCCCAAACTACAAGATTTTAGTGACATCAAGATTTACAATTAAAGGATTTGGGCAGCCAATCGTGTTGAAATCACTGAATGAAGCTGATGCTTTACACTTATTTCGCCACTCTGCATCCCTGGACCAGACCAGCTCTAATATTCCCGATACTATTGTGCAGAAGATAGCAAAAGGGTGCAGTGGTTCTCCCTTGGCACTTATAGTAACTGGAAAATCTTTAAGTCTTGAAGAACCAGTGGTTTGGCACAACAGGGCGAGGATATTGTCGAGGGGTCACTCTGTTCTTTATTATAGTTCTAGTAGCGATGGGCTTCTTACTTGCCTCCAAAAAAGCTTTGATGACTTGGATGCTAAGCTTGCTGAGAGTTTTATGGACCTGAGCTTATTTCCTGAAGCACAGAAGATACCCGCAGCAGCACTTGTTGATATTTACGCAGAACAGCGTGATGAAGACGATGACATTGCAATGGAGAATATCCATGACCTCGTCAAAAGGAACGTGGCTGATCTTGTTGTCACAAGGGATACTACGAGTGGCACAGTTGACTACAATTACCATTATGTTACGCAGCATGGTCTTCTTCGGGACCTAGCCATCCATCAAACAAGAAATTTGCCGACTGAGAAGAAGCATAGGCTAATAATTGACCTCAGAGGGAACAATATCCCCAAATGGTGGACTACACAGAATGAGTATCACATTGCAGCCCACTCATTATCCATATCAACTGATGAAGAATTCACTTCAGAGTGGTGCAACTTGCAGCCAAATGAGGTCAAGGTTCTAGTGATGAACCTTAGAGAAAAAAAGCGCTCTCTACCACCGTTCATGAAGAAAATGAATAAATTAAAAGTCCTGACAATAACGAATTATGACGTCAATCGTGCTGAGTTGGAGAATTTAGAGCTGCTTGATTATCTTTCTGATCTCAAAAGAATCAGGTTAGAGAAGGTTTCAATTCCTTTCCTTAGCAAGACTGGAGTGCCACTGAAGAATCTGCACAAGTTCTCTTTCTTTATGTGCAATGTGAACGAAGCCTTCAAAAACAACACCATCAAAGTTTCTGATGTGCTTCCAAATTTGAAGGAGATGAACATTGATTACTGTGATATGGAGGAATTGCCGGCTGGACTCTCCGATACTGTTTCCCTAAAGAAGCTAAGCATCACAAACTGCCATAAACTTTCAAAACTTCCTACAGGAATTGGAAAGTTGGTGAATTTGGAATCATTGAGGCTTACTTCTTGTACCAAATTAGAAGAGTTGCCAGACAGCATCACAAGCCTTCATAAACTGAACTTTCTTGACATTTCTGACTGTGTAAGTCTTAGGATGTTACCAGAAAACATAGGGGAGCTGGGTAGTTTAGAAAGGTTGAATTGCAGAGGTTGCAACAGATTGTCTGAATTGCCATACTCAGTGACGGACCTTGAGAGCTTAAGAGTGGTAGTATGCGATGAAGAGAGGGCTGCATTATGGGAACCTATCAGATCCATGTTTAGTGATCTAAAGCTAGAGGTAGTCCTAACTGATTTCAAACTAGATCCTCTTTTATAA 2403 0.4241 MAMVLDAVVGQVLDELLSTVIAMKDRAVKFRATLEKLHSTLEKVEPKARQIYALNKRLDKPAEESQKLIDEMQKGKELVIECSKVDWWNCCYKASSQEKLQDLIDSITLYFQLDMQGNINVIVLENQHLLKKLVESVPRRIEGLCSPPEPPAFTVGLDVHLGALKFKLLENHHEGSVLTVTGAGGSGKSTLAKKFCSDEEVKGKFKDNIFFISLVESPKLSTIVERLFEHNGYEKPQFQSDEGAVYRLENLLKQIGKQSILLVLDGVLPESASLVEKFVFQIPNYKILVTSRFTIKGFGQPIVLKSLNEADALHLFRHSASLDQTSSNIPDTIVQKIAKGCSGSPLALIVTGKSLSLEEPVVWHNRARILSRGHSVLYYSSSSDGLLTCLQKSFDDLDAKLAESFMDLSLFPEAQKIPAAALVDIYAEQRDEDDDIAMENIHDLVKRNVADLVVTRDTTSGTVDYNYHYVTQHGLLRDLAIHQTRNLPTEKKHRLIIDLRGNNIPKWWTTQNEYHIAAHSLSISTDEEFTSEWCNLQPNEVKVLVMNLREKKRSLPPFMKKMNKLKVLTITNYDVNRAELENLELLDYLSDLKRIRLEKVSIPFLSKTGVPLKNLHKFSFFMCNVNEAFKNNTIKVSDVLPNLKEMNIDYCDMEELPAGLSDTVSLKKLSITNCHKLSKLPTGIGKLVNLESLRLTSCTKLEELPDSITSLHKLNFLDISDCVSLRMLPENIGELGSLERLNCRGCNRLSELPYSVTDLESLRVVVCDEERAALWEPIRSMFSDLKLEVVLTDFKLDPLL 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01703 800 Gene3D - 135 297 IPR027417 -
Vian1g01703 800 PRINTS Disease resistance protein signature 254 268 - -
Vian1g01703 800 PRINTS Disease resistance protein signature 341 355 - -
Vian1g01703 800 PRINTS Disease resistance protein signature 177 192 - -
Vian1g01703 800 PRINTS Disease resistance protein signature 709 725 - -
Vian1g01703 800 Gene3D Ribonuclease Inhibitor 489 781 IPR032675 -
Vian1g01703 800 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 408 IPR027417 -
Vian1g01703 800 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Vian1g01703 800 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 2 796 IPR039203 GO:0050832
Vian1g01703 800 Pfam NB-ARC domain 160 371 IPR002182 GO:0043531
Vian1g01703 800 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 7 118 IPR008808 -
Vian1g01703 800 Gene3D - 306 393 IPR042197 -
Vian1g01703 800 Gene3D - 394 483 IPR036388 -
Vian1g01703 800 SUPERFAMILY RNI-like 552 765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01703 Vian-Chr1 19655849 19659307 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01703 646 765 WRKY Transcription Factor Family AT4G12020 32.231 1.99e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01703 - - vra:106755496 1273.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01703 1 19655849 19659307 Vian1g01703 1 19655849 19659307 ECH