Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01702 ATGGCTATGATTCTGGATGCTGTTGTTGGACGAGTGCTTGATGAACTGCTGAGCACTGTTATTGCAATGAAAGACAGGGCAGTGAAGTTCAGAGCCACCCTGGAAAATTTGCATTCTATCCTCAAAAAAGTAGAACCGATGGCTAGGGAGATAGATGGTCTTAACAAGCGATTGGATAAACCAGCTACAGAAACGCAGACGCTGATCGATGAGATGGAGAAGGGGAAGGAGCTTGTTATTGAGTGCTCCAAAGTTGATTGGTGGAATTGCTGTTATAAGGCCAGTTCCCAAGAGAAACTTCAAGACTTGATCGATTCTATTACTCTGTACTTTCAATTGGATATGCAAGGAAATATAAATGTCATTGTGCTGGAGAACCAGATGCTGCTGCATCAGATTCACGAGAAGCTTGTGGAGAATGTTCCGAGAAGGATTGCAGGCTTGTGCTCCCCACCTGAACCCCCAGCTTTCACTGTTGGGCTGGATGTTCATTTGAGGGCGTTGAAGTTCAAGTTGCTGAAGAATCATCATGTGGGGTCAGTGCTCACAGTAACTGGAACAGGAGGTTCGGGAAAGTCAACGTTGGCCAAGAAGTTTTGTTCTGATGAGGAAGTTAAAGGTGAATTCAAGGACAACATATTCTTCATCTCCTTAGCGGAAGTGCCCAAGTTGAGCACCATAGTGGAGAGACTGTTTGAACACAATGGTTACGAGAAGCCACAGTTTCAAAGTGATGAGGGTGCAGTTGATCGATTGGAAAATTTGCTAAAACAGATTGGAAAAAACCCCATATTGTTGGTCTTGGACGGTGTTTTGCCAGAGTCAGCATCTCTAGTTGAGAAATTCGTGTTTCAGATCCCAAACTACAAGATTTTAGTGACATCAAGATTCACAATTAAAGGATTTGGGCAGCCATACGTGTTGAAATCACTGAATGAAGCTGATGCTTTAAACTTATTTCGCCACTATGCATCCCTGGACCAGACCAGCTCTACGATTCCCGATACTATTGTGAAGAAGATAGCAAAAGGGTGCAGTGGTTCTCCCTTGGCACTTATAGTAACCGGAAAATCTTTAAGTCTTGAAGAACCAGTGGTTTGGCACAACAGGGCGAGGACATTGTCGAGGGGTCAATCTGTTCTTTCTTATAGTTCTAGTAGCGATGGGCTTCTTACTTGCCTCCAAAAATGCTTTGATGACTTGGATGCTAAGCTTGCTGAGAGTTTTATGGACCTGAGCTTATTTCCTGAAGCACAGAAGATACCCGCAGCAGCACTTGTTGATATTTATGCAGAACAGCGCGATGAAGACGATGACATTGCAATGGAGAATATCCATAAACTCGTCAAAAGGAACGTGGCTGATCTTGTTGTCACAAGGAATACTACGAGTGGAACAGTTGACTACAATTACCACTATGTTACGCAGCATGGTCTTCTTCGGGACCTAGCCATCCATCAAACAAGAAATTTGCCGACTGAGAAGAAGCATAGGCTAATAATTGACCTCAGAGGGAACAATATCCCCAAATGGTGGACTACACAGAATGAGTATCACATTGCAGCCCACTCATTATCCATATCAACTGATGAAGAATTCACTTCAGAGTGGTGCAACTTGCAGCCAAGTGAGGTCAAGGTTCTAGTGATGAACCTTAGAGAAAAAAAGCGCTCTCTACCACCGTTCATGAAGAAAATGAATAAATTAAAAGTCCTGACAATAACGAATTATGACGTCAATCGTGCTGAGTTGGAGAATTTAGAGCTGCTTGATTATCTTTCTGATCTCAAAAGAATCAGGTTAGAGAAGGTTTCAATTCCTTTCCTTAGCAAGACTGGAGTGCCACTGAAGAATCTGCACAAGTTCTCTTTCTTTATGTGCAATGTGAACGAAGCCTTCAAAAACAGCACCATCAAAGTTTCTGATGTGCTTCCAAATTTGAAGGAGATGAACATTGATTACTGTGATATGGAGGAATTGCCGGCTGGACTCTCCGATACTGTTTCCCTAAAGAAGCTAAGCATCACAAACTGCCATAAACTTTCAAAACTTCCTACAGGAATTGGAAAGTTGGTGAATTTGGAATCATTGAGGCTTACTTCTTGTACCAAATTAGAAGAGTTGCCAGACAGCATCACAAGCCTTCATAAACTGAACTTTCTTGACATTTCTGACTGTGTAAGTCTTAGGACGTTACCAGAAAACATGGGGGAGCTGGGTAGTTTAGAAAGTTTGAATTGCAGAGGTTGCAACAGATTGTCTGAATTGCCATACTCAGTGACGGACCTTGAGAGCTTAAGAGTGGTAGTATGCGATGAAGAGACGGCTGCATTATGGGAACCTATCATATCCATGTTTAGTGATCTAAAGCTAGAGGTAGTCCTAACTGATTTCAAACTAGATGCTCTTTTATAA 2415 0.424 MAMILDAVVGRVLDELLSTVIAMKDRAVKFRATLENLHSILKKVEPMAREIDGLNKRLDKPATETQTLIDEMEKGKELVIECSKVDWWNCCYKASSQEKLQDLIDSITLYFQLDMQGNINVIVLENQMLLHQIHEKLVENVPRRIAGLCSPPEPPAFTVGLDVHLRALKFKLLKNHHVGSVLTVTGTGGSGKSTLAKKFCSDEEVKGEFKDNIFFISLAEVPKLSTIVERLFEHNGYEKPQFQSDEGAVDRLENLLKQIGKNPILLVLDGVLPESASLVEKFVFQIPNYKILVTSRFTIKGFGQPYVLKSLNEADALNLFRHYASLDQTSSTIPDTIVKKIAKGCSGSPLALIVTGKSLSLEEPVVWHNRARTLSRGQSVLSYSSSSDGLLTCLQKCFDDLDAKLAESFMDLSLFPEAQKIPAAALVDIYAEQRDEDDDIAMENIHKLVKRNVADLVVTRNTTSGTVDYNYHYVTQHGLLRDLAIHQTRNLPTEKKHRLIIDLRGNNIPKWWTTQNEYHIAAHSLSISTDEEFTSEWCNLQPSEVKVLVMNLREKKRSLPPFMKKMNKLKVLTITNYDVNRAELENLELLDYLSDLKRIRLEKVSIPFLSKTGVPLKNLHKFSFFMCNVNEAFKNSTIKVSDVLPNLKEMNIDYCDMEELPAGLSDTVSLKKLSITNCHKLSKLPTGIGKLVNLESLRLTSCTKLEELPDSITSLHKLNFLDISDCVSLRTLPENMGELGSLESLNCRGCNRLSELPYSVTDLESLRVVVCDEETAALWEPIISMFSDLKLEVVLTDFKLDALL 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01702 804 Gene3D - 310 387 IPR042197 -
Vian1g01702 804 Gene3D Ribonuclease Inhibitor 493 780 IPR032675 -
Vian1g01702 804 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 7 118 IPR008808 -
Vian1g01702 804 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Vian1g01702 804 SUPERFAMILY L domain-like 494 774 - -
Vian1g01702 804 Gene3D - 136 300 IPR027417 -
Vian1g01702 804 Gene3D - 393 487 IPR036388 -
Vian1g01702 804 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 412 IPR027417 -
Vian1g01702 804 PRINTS Disease resistance protein signature 713 729 - -
Vian1g01702 804 PRINTS Disease resistance protein signature 181 196 - -
Vian1g01702 804 PRINTS Disease resistance protein signature 258 272 - -
Vian1g01702 804 PRINTS Disease resistance protein signature 345 359 - -
Vian1g01702 804 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 2 801 IPR039203 GO:0050832
Vian1g01702 804 Pfam NB-ARC domain 164 399 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01702 Vian-Chr1 19643545 19647016 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01702 650 769 WRKY Transcription Factor Family AT4G12020 31.405 1.44e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01702 - - vra:106755496 1280.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01702 1 19643545 19647016 Vian1g01702 1 19643545 19647016 ECH