Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01700 ATGGACCAGACCACGCAGCGCGTTGTACTTCCAGCACTATTTCAAGAGAGATTGAGGATGGTATCGGAAATAGTGGAAAAAGGTAAAAGTAGTGATAGCAACAAGCAGATACTGAGGTCAACGCTCAAGGATATGAACCCTGTGGTGCAAGAGATCAAGCAATACAATGAACACTTAAATCCACCCAGAGAAGAAATCAAAACCCTTATTTCAGAAAAGGATGCGAAAGAAGAGCTTGTGGGCAAATGCTTATCCAAAAAATTTTGTTTGGACAAGTGTCTCTCTTTGTTTCTGTGCAGATTTGGACACAAGAGGGATGGTTCATTTGCTGGTGGTGACAAGCAAGCTCTTGTGGCAAAAGATATTGAAGAGAAACTGTACAAAGTTAGGGAAATTCTTGAGCTTCTCAGCAAAGAGAATTTTGAGCAGAAGCTTGGTGGTGTTGGAGGACCTATCAGGCTTCCTTTTGGTGTTCCTGATAACCCAGATTTCACTGTTGGCTTGGATGTGCCGTTCAGCAAGTTGAAGATGGAGGTTCTCAGAGATGGTGTGTCTGTTATTATGCTGACTGGTTTGGGTGGAATGGGGAAAACCACTCTTGCTACAAAGCTCTGTTGGGATGAACAAGTCAAGGGTAAATTTGGGGGAAATATTTTATTTGTCACCGTCTCAAAAACAGCCAAGTTGAAGATTATTGTAGAGAGATTGTTTCAACACTGTGGATATCAAGTACCTGATTTTCTAAGTGATGAAGATGCAGCTAATCAATTGGGACTTTTGCTAAAGCAAATTGGTAGAAGTTCAATGTTGTTGGTACTGGATGATGTTTGGCCTGGCTCAGAAGCCCTTGTCGAGAAGTTTAAAGTCCAGATACCAGATTATAAAATTTTGGTGATTTCTAGGGTTGCATTGCTTAGATCGGACATGCAGTGTATCTTAAAACCACTTGGTCATGATGATGCAGAAACTCTTTTCCGACATTATACGCACTTAGAAGAAAGTGGTTCAAGTATTCCTGATGAAGTCATCCAAAAGGTGCCAATGGAATTGGGTTGTGAGAAACTGCAAGGGTTTACCGCTTGCCATCAAAGTAGTTGGGAGATCACTCTGTAA 1113 0.4142 MDQTTQRVVLPALFQERLRMVSEIVEKGKSSDSNKQILRSTLKDMNPVVQEIKQYNEHLNPPREEIKTLISEKDAKEELVGKCLSKKFCLDKCLSLFLCRFGHKRDGSFAGGDKQALVAKDIEEKLYKVREILELLSKENFEQKLGGVGGPIRLPFGVPDNPDFTVGLDVPFSKLKMEVLRDGVSVIMLTGLGGMGKTTLATKLCWDEQVKGKFGGNILFVTVSKTAKLKIIVERLFQHCGYQVPDFLSDEDAANQLGLLLKQIGRSSMLLVLDDVWPGSEALVEKFKVQIPDYKILVISRVALLRSDMQCILKPLGHDDAETLFRHYTHLEESGSSIPDEVIQKVPMELGCEKLQGFTACHQSSWEITL 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01700 370 Coils Coil 119 139 - -
Vian1g01700 370 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 335 IPR027417 -
Vian1g01700 370 Gene3D - 152 312 IPR027417 -
Vian1g01700 370 PRINTS Disease resistance protein signature 186 201 - -
Vian1g01700 370 PRINTS Disease resistance protein signature 263 277 - -
Vian1g01700 370 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 6 345 IPR039203 GO:0050832
Vian1g01700 370 Pfam NB-ARC domain 182 329 IPR002182 GO:0043531
Vian1g01700 370 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 10 85 IPR008808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01700 Vian-Chr1 19619785 19621871 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01700 - - pvu:PHAVU_006G0277000 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01700 1 19619785 19621871 Vian1g01700 1 19619785 19621871 ECH
Vian10g00617 10 5908821 5914510 Vian1g01700 1 19619785 19621871 PCT