Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01696 ATGGGAGAGACCGATCAACTTGTTATTTTGACAAGATTTCAAGATGCAATGAGAATGGTCATGGACATAGTCGAAAAGGGTAGGAAGAACAAAAGGAGCAAGCGAATACTTAGGTCAACCCTAAAAAATATGACTCTAGTGGTGCAGGAGATAAAGCAATACAATGAACACTTGAATCCACCCAGAGAAGAAATCATCACTCTTGTCAAAGAAAATGATCCAGGGGAAGATCTTGTGTGCAATTCATGCTCCCGGAGCTTGTGGTGGACCAAATTTCTATCTTGGTTTTCACTCTACGGGGAGGGATTTTTGCATGAGAAGAATGATTTGCTTACTTCGGATGACAAACAAGTTAAGGATATAAAAAATACACTGTACAAGGTGAGAGAGATTATTGAGCTTCTTGATATTGAGAATTTTGAGCAGAAACTTAAAGGAGCTGGAACGCCAATTAAGTGTCCTTATGGTGTTCCTGAAAACCCAGAATTTACTGTTGGCTTCGTTCCAGTGTTGAGCAAGTTGAAGATGGAGGTTCTCCAGGAAGGTGTGTTCACCCTTTTGTTGTCTGGCCTGGGTGGATCTGGTAAAACAACCTTGGCTACAATGCTCTGTAAGGATAAAGAAGTCAAGGGTAAATTCAAGAACAATATTTTGTTTGTCAATTTCTCCCAAACGCCTAAGTTGAAGAATATCGTAGAGAGATTATTTGAACATTGTGGCTACCACGTGCCTGAGTTTGTAAGTGATGAAGATGCAATTAAACGGTTGGAAATTTTGATGAGGAAAATTGAGGGAAGTCCACTGTTGTTGGTCTTGGATGATGTTTGGCCAGGCTCGGAAGCCCTTGTTGACAAGTTTAAATTCCAGATGTCTGATTATAAAATTTTGGTTGTGAGATATTGCAAGGGTTTACCGCTTGCCATTAAAGTGATTGGTAGATCGCTGAGTCATCAGTCTACTGAGTTGTGGCAAAAGATGGTGGAGGAGTTGTCAAAAGGTCATTGTATACTTGATTCCAACACTGAATTACTTACTTCCCTCCAAAAGATCTTGGATGTATTGGAAGATAATCCCATCATCAAAGAGTGCTTCATGGACCTTGGGTTATTTCCTGAAGATCAAAGAATTCCTCTTCCTGCTCTCATTGACATGTGGGCAGAATTGTACAAATTAGATGATGATGGCATAGAGGCTATGGAAATCATAAAAAAATTGGACTCCATGAATCTGGCTAATCTTTTAGTAGCAAGGAGAAATACAGGTGACTCAGATAATTACTGCTACAATAACCACTTTGTCGTCCTCCATGATCTTCTAAGAGATCTTGCAATTTATCAAAACAACCGGGAACCAATTGAACAGAGAAAGAGAATTATTACTGGCATAAATGAAAATCAAAGTCAATGGTGGCTTGGGGAAAAGCAACAAGGCATGATGTCCCGCTTGTTGTCAAAATATCGCGGATGGTGTGTTAAACAGACTATTCAACAGGTCTCAGCCCTCATATTGTCGCTGTCAACTGATGAAACTTGTGCTTCATATTGGTCCGACATACAACCATCCCAAGCAGAAGTTCTGATTTTAAATCTTCAAACTAAGAAGTACACCTTTCCGGAGTTCATGGAGAAAATGATTAAACTAAAAGTCCTTATCGTGACAAATTATGGTTTTCATCATTCTGAACTAGACAATTTCCAACTACTAGGTTCTGTATCGAACCTGAAAAGAATCAGACTAGAGCGGGTTTCTGTTCCTCACTTGAGCGCATTGAAAAATCTGAAAAAGTTATCTCTCTACATGTGTAGTAACATAAGCCAGGTTTTTGAAAATGGCACCATCCTAGTTTCAGATTCATTTCCAAGTTTATTAGATTTAAACATTGACTATTGCAAGGATATGGTGAGATTGCCTAATGGTATCTGTGACATTTCCTCTCTAAAGAAGCTCAGCATTACTAACTGCCACAAACTTTGTTCTCTGCCCCAAGAAATTGGACAGTTGTTGAATTTGGAACTCCTAAACCTAAGTACCTGTACTGACTTGGAAGAGATACCAGATTCTATTCAAAACCTTTCTAAGCTAAGACTTCTTAACATCTCAAACTGCATAAGCCTTTCAAATTTACCAGAGGACATTGGTAATCTATGTAATCTCAGAAATCTCAATATGACAAGCTGTGCTAGATGTGAACTGCCATATTCAATAACCAATCTTGAGAATTTAAAAGTAGTGGTATGCGATGAGGAGACAGCGGCCTCATGGGAAGCATTCGAAGCTTTGCTTCCCAATCTGAAGGTGGAGGTTCCTCAAGTTGATGTTAACCTAAACTGGCTTCATTCAATAAGCTCCTAA 2352 0.3916 MGETDQLVILTRFQDAMRMVMDIVEKGRKNKRSKRILRSTLKNMTLVVQEIKQYNEHLNPPREEIITLVKENDPGEDLVCNSCSRSLWWTKFLSWFSLYGEGFLHEKNDLLTSDDKQVKDIKNTLYKVREIIELLDIENFEQKLKGAGTPIKCPYGVPENPEFTVGFVPVLSKLKMEVLQEGVFTLLLSGLGGSGKTTLATMLCKDKEVKGKFKNNILFVNFSQTPKLKNIVERLFEHCGYHVPEFVSDEDAIKRLEILMRKIEGSPLLLVLDDVWPGSEALVDKFKFQMSDYKILVVRYCKGLPLAIKVIGRSLSHQSTELWQKMVEELSKGHCILDSNTELLTSLQKILDVLEDNPIIKECFMDLGLFPEDQRIPLPALIDMWAELYKLDDDGIEAMEIIKKLDSMNLANLLVARRNTGDSDNYCYNNHFVVLHDLLRDLAIYQNNREPIEQRKRIITGINENQSQWWLGEKQQGMMSRLLSKYRGWCVKQTIQQVSALILSLSTDETCASYWSDIQPSQAEVLILNLQTKKYTFPEFMEKMIKLKVLIVTNYGFHHSELDNFQLLGSVSNLKRIRLERVSVPHLSALKNLKKLSLYMCSNISQVFENGTILVSDSFPSLLDLNIDYCKDMVRLPNGICDISSLKKLSITNCHKLCSLPQEIGQLLNLELLNLSTCTDLEEIPDSIQNLSKLRLLNISNCISLSNLPEDIGNLCNLRNLNMTSCARCELPYSITNLENLKVVVCDEETAASWEAFEALLPNLKVEVPQVDVNLNWLHSISS 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01696 783 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 297 778 IPR039203 GO:0050832
Vian1g01696 783 Pfam NB-ARC domain 181 279 IPR002182 GO:0043531
Vian1g01696 783 Gene3D - 346 447 IPR036388 -
Vian1g01696 783 Gene3D - 151 299 IPR027417 -
Vian1g01696 783 SUPERFAMILY RNI-like 533 760 - -
Vian1g01696 783 Gene3D Ribonuclease Inhibitor 492 760 IPR032675 -
Vian1g01696 783 PRINTS Disease resistance protein signature 262 276 - -
Vian1g01696 783 PRINTS Disease resistance protein signature 689 705 - -
Vian1g01696 783 PRINTS Disease resistance protein signature 185 200 - -
Vian1g01696 783 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 367 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01696 Vian-Chr1 19571032 19574697 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01696 570 741 WRKY Transcription Factor Family AT4G12020 28.061 5.64e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01696 - - gmx:100800632 1209.51