Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01695 ATGGATCGGGCGGCGTTGACGGTCGGACCGGGCATGGACATGCCGATCATGCACGACAGTGACCGTTACGATCTGGTCCGTGACATCGGGTCCGGAAATTTCGGCGTGGCCAGGCTGATGCAGGATAAACAGACCAAGGAACTCGTTGCCGTCAAGTACATCGAAAGGGGCGATAAGATTGACGAAAATGTGAAGAGGGAAATTATTAACCACAGGTCTTTGAGACATCCCAATATTGTTAGATTTAAAGAGGTTATTTTAACACCTACTCATCTGGCGATTGTAATGGAATATGCCTCTGGAGGCGAGCTCTTTGAGAGAATCTGCAATGCTGGGCGTTTTACCGAGGACGAGGCTCGGTTCTTCTTTCAGCAACTCATATCCGGGGTTAGTTATTGCCATGCTATGCAAGTATGTCATCGGGACTTAAAGCTGGAAAACACTTTGTTGGATGGAAGCCAGGCACCTCGTTTGAAGATATGTGATTTTGGGTACTCCAAGTCTTCAGTGCTACATTCACAACCGAAGTCAACTGTGGGGACTCCTGCATATATTGCTCCAGAAGTATTGCTGAAACAAGAGTATGATGGCAAGCTTGCAGATGTCTGGTCGTGTGGAGTGACCCTATATGTGATGCTAGTGGGAGCATATCCTTTTGAAGATCCAAATGAACCAAAGGACTTTCGGAAGACAATTCAGAGAATTCTTAGTGTCCAATATGCCATTCCTGACTGTGTTCAAATATCTCAAGAGTGTCGCCACCTTATTTCAAGGATTTTTGTTTTTGACCCAGCAGAGAGAATCACCATGTCTGAAATCTGGAACCATGAATGGTTTCTGAAGAATCTTCCTGCGGATCTGATGGATGAGAGGATAATGAGTAATCAATTTGAAGAGCCAGACCAACCCATGCAGAGCATTGATACGATCATGCAGATAATTTCAGAAGCTACGGTACCAGCAGCTGGGACCTATACTTTTGACCAGTTAATGGGGGAGCAAATTTATGACTTAGAATCTGAATCTGATGCTGAATCTGAGCTTGATATAGATAGCAGTGGGGAGATAGTGTATGCCATATAG 1083 0.4497 MDRAALTVGPGMDMPIMHDSDRYDLVRDIGSGNFGVARLMQDKQTKELVAVKYIERGDKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFTEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSQAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKQEYDGKLADVWSCGVTLYVMLVGAYPFEDPNEPKDFRKTIQRILSVQYAIPDCVQISQECRHLISRIFVFDPAERITMSEIWNHEWFLKNLPADLMDERIMSNQFEEPDQPMQSIDTIMQIISEATVPAAGTYTFDQLMGEQIYDLESESDAESELDIDSSGEIVYAI 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01695 360 SUPERFAMILY Protein kinase-like (PK-like) 16 317 IPR011009 -
Vian1g01695 360 Gene3D Transferase(Phosphotransferase) domain 1 99 286 - -
Vian1g01695 360 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Vian1g01695 360 PANTHER SERINE/THREONINE KINASE 22 305 - -
Vian1g01695 360 FunFam Serine/threonine-protein kinase SRK2E 99 287 - -
Vian1g01695 360 SMART serkin_6 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g01695 360 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Vian1g01695 360 CDD STKc_SnRK2 22 278 - -
Vian1g01695 360 FunFam Serine/threonine-protein kinase SRK2E 14 98 - -
Vian1g01695 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Vian1g01695 360 Pfam Protein kinase domain 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g01695 360 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01695 Vian-Chr1 19561711 19566184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01695 22 289 CBL-interacting serine-threonine protein kinases AT4G24400 43.682 1.14e-66 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Vian1g01695 Pkinase 4.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01695 K14498 - gmx:100806949 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01695 1 19561711 19566184 Vian10g00616 10 5897845 5907248 PCT