Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01673 ATGGATATGGCTCAGCTGAAGACACGAGCTCGAACTGCATTGGGCGTTGGAGCTTCTGCGACTTCACCGAAGAGAAGGAAAATCGCCATTAACAAAAACAGCAACAACATCTCACCGTCCTCCTGCGTTCAACTCAAGAGTAATACAACGTCGCCGGAGTCGGAGGAGCGCTGTTCCGGTGAATCTCCGGCGTCGTGTTGCTCCAGCAACGGATCATTCGACGAAAACCGAATCATCAAATTCTCAGATCTGGAGGTAGAGAACGCTCAAGTTGAAACGTCGACGTGCAACTGCGGTGAACAACAAATGAGGAGGGAGATGAGTCTCTCGAGTGACCTTCGAATTACGAATTCGCAGGAGGTGGATTCAGCGGAGAAGAAGCCAACGATGCAGACCAAAACCAAGTCTCGATGTTGCGTTCCACCAGCGCCGCAGAAAATGCCAACGGAGTCAGAGCTCGAAGAATTCTTCGCCGCCGCTGAGAAAGACATTCAGAAACGCTTCTCAGAAAAGTATAATTATGATATTGTGAAGGACATGCCCTTGGAAGGACGATACGAGTGGGTGAAATTGAAGCCATAA 582 0.4948 MDMAQLKTRARTALGVGASATSPKRRKIAINKNSNNISPSSCVQLKSNTTSPESEERCSGESPASCCSSNGSFDENRIIKFSDLEVENAQVETSTCNCGEQQMRREMSLSSDLRITNSQEVDSAEKKPTMQTKTKSRCCVPPAPQKMPTESELEEFFAAAEKDIQKRFSEKYNYDIVKDMPLEGRYEWVKLKP 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01673 193 PIRSF CKI_KRP_plant 1 193 IPR044275 GO:0004861|GO:0045736|GO:0051726
Vian1g01673 193 Gene3D p27 135 193 IPR044898 -
Vian1g01673 193 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 5 192 IPR044275 GO:0004861|GO:0045736|GO:0051726
Vian1g01673 193 MobiDBLite consensus disorder prediction 117 147 - -
Vian1g01673 193 Pfam Cyclin-dependent kinase inhibitor 147 191 IPR003175 GO:0004861|GO:0005634|GO:0051726
Vian1g01673 193 MobiDBLite consensus disorder prediction 26 72 - -
Vian1g01673 193 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01673 Vian-Chr1 19201773 19202868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01673 79 193 Core Cell Cycle Gene Families AT1G49620 43.966 1.02e-21 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01673 - - ccaj:109818608 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01673 1 19201773 19202868 Vian1g01673 1 19201773 19202868 ECH