Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01649 ATGGCTAATGAAGATGAACCCAAAAACCACCTCTTGGGCATCAGAAATCTCTCTCATAAGACTCTCCTTCAGAGCGATGCACTCTATCAGTACATACTTGAAACCAGTGTTTATCCAAGAGAGCACAAGTGCTTGAAGGAGATCCGCGAGATGACAGAAAAACACCCTCGGAACATAATGGCTACACCACCAGACGAAGGACAATTTCTGAGCATGCTTATTAAGCTCATTAATGCCAAGAACACCTTGGAAATTGGTGTATACACCGGTTACTCTCTTCTTTCCACTGCCCTGGCTCTTCCCCCTGCTGGAAAGATCTTGGCTTTGGACGTGAACCGCGAATACTATGAATTGGGTTTGCCCATCATTGAAAAAGCTGGTGTCGCTCACAAGATCGACTTCAGAGAAGGACCTGCTCTTCCTTTTCTTGACGAACTGCTTAAAGATGAAAATAAGAAGGGACAGTTCGATTTCGTTTTCGTGGATGCTGATAAGAACAATTACTTGAACTATCACAAGAGAGTAATTGATCTGGTGAAGGTGGGAGGTCTGATCGGATACGACAACACCCTATGGGCTGGATCTGTGGCCGCGCCTCCTGATGCACCGTTGATGGATTACGTTAAACCTCTTCGCGGCTATGTGATGGAGTTCAACAAGTACCTGGCACAAGATTCAAGGATTGAGATTTGCCAGCTCCCCGTGGGTGATGGGATTACCCTGTGCCGCCGCATCATCTGA 741 0.4656 MANEDEPKNHLLGIRNLSHKTLLQSDALYQYILETSVYPREHKCLKEIREMTEKHPRNIMATPPDEGQFLSMLIKLINAKNTLEIGVYTGYSLLSTALALPPAGKILALDVNREYYELGLPIIEKAGVAHKIDFREGPALPFLDELLKDENKKGQFDFVFVDADKNNYLNYHKRVIDLVKVGGLIGYDNTLWAGSVAAPPDAPLMDYVKPLRGYVMEFNKYLAQDSRIEICQLPVGDGITLCRRII 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01649 246 Gene3D Vaccinia Virus protein VP39 11 246 IPR029063 -
Vian1g01649 246 FunFam Caffeoyl-CoA O-methyltransferase 1 14 246 - -
Vian1g01649 246 PANTHER O-METHYLTRANSFERASE-RELATED 18 245 - -
Vian1g01649 246 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 21 245 IPR002935 GO:0008171
Vian1g01649 246 Pfam O-methyltransferase 34 245 IPR002935 GO:0008171
Vian1g01649 246 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 25 244 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01649 Vian-Chr1 18809485 18810649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01649 4 245 Monolignol Biosynthesis Gene Families AT4G34050 73.140 2.27e-132 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01649 K00588 - gmx:100305498 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00578 10 5459894 5461039 Vian1g01649 1 18809485 18810649 ECH
Vian1g01649 1 18809485 18810649 Vian1g01649 1 18809485 18810649 ECH
Vian10g00578 10 5459894 5461039 Vian1g01649 1 18809485 18810649 PCT