Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01646 ATGGAAGCCGTGGAAGTCATCACCACCACCACAATCAAGGCACCCACTCATAGTATCCATAACTCACCTCGTAAAATCCATTTAACTCCATTTGATCTTCCATTTCTCACCGTTGAATCCATCCAAAAAGGTCTTCTTTTTGGCAGCCCAAAAGACACAGCATTCCAAATAAATAATCTTCAACGTTCACTTTCCTCCACCCTTGCCTTCTTTCCTCCCATCACTGGTCGTCTCGTCATACTCCAACATCACGACAACATTGTCTCAACCCACATCCTTTGCAACAACGCCGGAGTCCTCTTTGTCCACGCCGTTGCACCCAACACCACTGTCGCTCACATCCTTCAACCCAAATACAACCCTCCCATCATTCGCTCCTTCTTTCCACTCAACGGCGTTAAAAACTACAAGGGCACTTCACAGCCATTGCTGGCAGTGCAGGTGACGGAGCTAGTTGACGGCATCTTCATCGCCCTAACAATCAACCATGTCGTTGCTGACGGCAACTCGCTGTGGCATTTCGTGAATTCCTGGGCTGAAATCTCACGTGGCTCCCTTAAAATATCCAAACTCCCTTCTCTCCACCGTTACTTTCCCGATGGCATTGAACACCCCATGCGCTTTCCCTTCACAGAGGAGGAAGAAACCCAACACTCCCCAAACCTCAAACAACAAATTCCGCCTGAGAGGGTCTTCCATTTCGGGAAGGAAAAAATCGCGGAACTGAAAAGAAAAGCCAACGCAGAAGCCAACACAGACAAAATATCTTCTCTGCAAGCGCTTTTAACTCTACTTTGGCGCTGTGTGATTCGTTGCCGACACGTAGAGCCTGAAGAAGAGATAAGTTACGTGCTTGCGATTGGCGTTGGGCCCAGGATGGTTCCACCACTGGCAGAGGGTTATTTTGGAAACTCAGTGATGTTTGGCTTTGTGACCATGAAAGCCGGGGAACTACTGGAGGGTGGTCTTGGGAAGGGTGCTCTGGACATGAACAAGATGATTGCTTTGCACTCTCATGAGAGGGTAAAGAACCACTATGAGTCTTGGATGAGAACTCCGAGGCTGCTTAAATTGTTTGGTGGTTCACTGGTCACTAGCAGTTCTCCGAGGTTCGACTTTTACGGTAACGATTTTGGGTGGGGAAAGCCCGTGGCGGTAAGAAGTGGTGGCGCAAATAAGGGTTGCGGAAAGATTAGTGTGTATGCAGGCGCTGAAGAAGGTTCTATCGACATTGAAGTGTGCCTTCCTTTTGAGATTTTGGAGGCAATGGAAAATGACCCCGACTTCATGGATGCGGTTTCCAGCTAG 1308 0.4855 MEAVEVITTTTIKAPTHSIHNSPRKIHLTPFDLPFLTVESIQKGLLFGSPKDTAFQINNLQRSLSSTLAFFPPITGRLVILQHHDNIVSTHILCNNAGVLFVHAVAPNTTVAHILQPKYNPPIIRSFFPLNGVKNYKGTSQPLLAVQVTELVDGIFIALTINHVVADGNSLWHFVNSWAEISRGSLKISKLPSLHRYFPDGIEHPMRFPFTEEEETQHSPNLKQQIPPERVFHFGKEKIAELKRKANAEANTDKISSLQALLTLLWRCVIRCRHVEPEEEISYVLAIGVGPRMVPPLAEGYFGNSVMFGFVTMKAGELLEGGLGKGALDMNKMIALHSHERVKNHYESWMRTPRLLKLFGGSLVTSSSPRFDFYGNDFGWGKPVAVRSGGANKGCGKISVYAGAEEGSIDIEVCLPFEILEAMENDPDFMDAVSS 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01646 435 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 430 - -
Vian1g01646 435 Pfam Transferase family 4 429 - -
Vian1g01646 435 Gene3D - 223 425 IPR023213 -
Vian1g01646 435 Gene3D - 2 206 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01646 Vian-Chr1 18766926 18768233 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01646 55 425 Monolignol Biosynthesis Gene Families AT5G48930 26.923 1.10e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01646 - - gmx:100797643 604.749