Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01645 ATGGAAAACGTTCGAGTCATCTCCACCACCACAATCAAAGCAACCGTTCCCAGTAACGCTAACTCACCTCATACAGTAGATTTAACTCCCTGGGATCTCCAATTCCTCCCTACTGAAACCATCCAAAAAGGCCTTCTTTTTCGCAACGTAAAAAACACACCATTCCAAATCCACCACCTCCAACACTCCCTTTCCTCCACTCTAGCATTCTTTCCACCCCTCGCAGGTCGTCTCGCCATACTCCGACATCATCACAGCATTGTCTCATCCCACATCCTATGCAACAACGCCGGAGCACTCTTTGTCCACGCCGTTGCACCCAACACCACTGTTGCACACATCCTTCAACCAAAATACGTTCCTCTCATTGTTTCCTCCTTCTTTTCAATCAACGGAGTTAAAAACTACGAGGGCACGTCGCAGCCATTGCTGGCAGTGCAAGTGACGGAGCTAGTTGACGGCATCTTCATCGCCCTAACAGTAAACCACGTCGTTGCTGACGGCAAGTCATTGTGGCATTTCGTGAATTCCTGGGCTGAAATCTCACGTGGCTCCCTTCATATATCCAAACTTCCTTCTCTCGGCCGTTACTTCCCCGATGGCATTGACCACCCCATACACTTTCCCTTCACAGAGGAAGAAGAAAACCAACACTCCCCAAACCTCAAACCACAAGCTCCACACGAGAGGGTATTCCATTTCACGAAGGAAAAAATTGCCGAACTCAAATCAAAAGCTAATGCAGAGGCCAACACCGACAAAATATCTTCTCTGCAAGCGCTTCTAACTCTCCTTTGGCGCGCTGTGACACGTTGCAAGCGGGTGGAGCCGCAAGAGAACGTGCATTATGTGTTGTTCATTGGCGTTTGGTCGAGGATGGTTCCAGCACTGGCAGAGGGTTATTTTGGAAACTCAGTTATAGCCACTATTGTGACCATGAAATGTGGGGAACTATTGGAGGGTGGGCTTGGAAAGGGGGCTTTAGAGATGAACAAGGTGATTTCTTTGCAGTCTGGTGAGAAGGTAAAGAAGCAGTATGAATCTTGGGTGAGAAGGCCAAGGCTTTTAACGTTGCCGAGTGGCGTGGGTGGTAGTAATTACTTGATCACTAGCAGTTCTCCGAGGTTTAAGATATTAGATAACGATTTTGGTTGGGGAAAGGCTGAAGCAGTTCGAATTGGAGGTGGGCAACATAAACGTAACGGCATGATTACTGTGTTCGGCGGAGCTGAAGAAGGGTCCATTGACATTGTAGCCACCCTTCCTTATTTCATTCATGAGGCCATGGGAAATGACGCAGAGTTCATGGATGTTGTGTCCCACTAA 1326 0.4804 MENVRVISTTTIKATVPSNANSPHTVDLTPWDLQFLPTETIQKGLLFRNVKNTPFQIHHLQHSLSSTLAFFPPLAGRLAILRHHHSIVSSHILCNNAGALFVHAVAPNTTVAHILQPKYVPLIVSSFFSINGVKNYEGTSQPLLAVQVTELVDGIFIALTVNHVVADGKSLWHFVNSWAEISRGSLHISKLPSLGRYFPDGIDHPIHFPFTEEEENQHSPNLKPQAPHERVFHFTKEKIAELKSKANAEANTDKISSLQALLTLLWRAVTRCKRVEPQENVHYVLFIGVWSRMVPALAEGYFGNSVIATIVTMKCGELLEGGLGKGALEMNKVISLQSGEKVKKQYESWVRRPRLLTLPSGVGGSNYLITSSSPRFKILDNDFGWGKAEAVRIGGGQHKRNGMITVFGGAEEGSIDIVATLPYFIHEAMGNDAEFMDVVSH 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01645 441 Pfam Transferase family 4 423 - -
Vian1g01645 441 Gene3D - 2 205 IPR023213 -
Vian1g01645 441 Gene3D - 209 426 IPR023213 -
Vian1g01645 441 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01645 Vian-Chr1 18754772 18756097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01645 55 395 Monolignol Biosynthesis Gene Families AT5G48930 27.778 1.41e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01645 - - gmx:100797643 595.504