Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01638 ATGTTGTGGGGGATGGTGGTTCGATTAGAGTTTGATTTGATGGATGATGTGTTGTTCTGCAAAGGGTTGTGGTATGTGGAATGGTACGTTTTGTCAGATAGGTTGACTGCAGTGCTTCATACGATAGGTGCTGCATGTGCAGGTTCAAGATCGGCGAGGGCGAAGCCTTTGCATTGGACATCATGCTTGAAAATAGCCGAAGATGTGGCACACGGACTTGCTTATATACATCAAGTTTCAACTCTAATTCATGGCAACCTGAAATCTTCTAACGTTCTTCTTGGGACGGGCTTTGAAGCCTGTATTACGGACTATTGTTTGTCCCTCTTTGCAGATTCTTCGTTCACTGAAGATCCCGATTCTGCGGCTTATAGAGCACCCGAGGCTCGCAACTCTAGCGGCAGAGCCACATCCAAGTCTGATGTTTATGCTTTTGGAGTGCTTCTACTAGAGCTTTTGACCGGTAAACACCCTTCCCAACAACCTTTTCTTGCACCAGCGGATTTGCAAGATTGGGTGAGAACAATGAGAGATGATGATGGCAGTGAAGACAACCGGCTAGAGATGCTCACGGAGGTTGCCAGTATTTGCAGTGCAACCTCGCCGGAGCAGAGGCCAGCAATGTGGCAAGTCCTTAAGATGATACAGGGAATAAAGGACAGCGTTTCGATGGAGGATAATTCATTTACTGGGCTCTCTTAG 702 0.4701 MLWGMVVRLEFDLMDDVLFCKGLWYVEWYVLSDRLTAVLHTIGAACAGSRSARAKPLHWTSCLKIAEDVAHGLAYIHQVSTLIHGNLKSSNVLLGTGFEACITDYCLSLFADSSFTEDPDSAAYRAPEARNSSGRATSKSDVYAFGVLLLELLTGKHPSQQPFLAPADLQDWVRTMRDDDGSEDNRLEMLTEVASICSATSPEQRPAMWQVLKMIQGIKDSVSMEDNSFTGLS 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01638 233 Gene3D Transferase(Phosphotransferase) domain 1 39 230 - -
Vian1g01638 233 ProSiteProfiles Protein kinase domain profile. 1 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g01638 233 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 29 221 IPR046959 -
Vian1g01638 233 SUPERFAMILY Protein kinase-like (PK-like) 33 220 IPR011009 -
Vian1g01638 233 Pfam Protein tyrosine and serine/threonine kinase 42 213 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01638 Vian-Chr1 18608471 18609492 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01638 48 227 Receptor kinase-like Gene Family AT3G50230 62.162 5.73e-74 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vian1g01638 PK_Tyr_Ser-Thr 3.8e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01638 - - gmx:100783086 348.977