Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01633 ATGGCCGTGGAGCTCATGACAGGCTACAGAACCACCACTTTCACCACCAAAGCAGAGGAAAATGCCGTCCAGGAAGCAGCCTCCGGTTTGGAGAGCGTGGAGAAGCTCATCAGAATCCTCTCTCAGACTCCCCAACAATACAACTCCTCCAATCAAATAGCTATCGACTGCAAGGCCGTCGCCGACCTCGCAGTTTCCAAGTTCAAAAACGTCATTTCGCTCCTCGGCCCAGGCCCAACCCCAACCCCAGCCCCAACCGGCCACGCCCGCTTCCGAAGAGCTCCTCTTCCTCCTCCTCCGTCTCCTCCTTCCACACAACCCTCCCAGCCTCCCGTCTTCCACGCCACCCCTCTGCACCAAATCCCCAAAACAGACGGCACCCTCAACGACTCCTCTTCAAAAACCATTTATTTCTCCTACCCCTCCCCCGCCACTTCCTTCATCTCCTCCCTCACCGCCGACGCCCACACAAAACAACCCTCTTCCTCCTCGCCGCCCCCGCCTGCGCCGGGTTCTTTCCACATCACCACTCTCTCCCACGTCTCATCCGCTGGGAAGCCTCCCCTCTCCTCCTCCTCCTCTTTCAAGAGGAAGTGCAGCTCTGAGAACTTGCCTTCTGGAAAGTGCGGTAGCTCCTCTAGCCGCTGTCATTGCTCCAAAAAGAGTAGGAAAATGAGGTTGAAGAAGGTGGTGAGGGTACCGGCTATAAGCTTGAAGATGGCCGATATTCCACCGGATGATTATTCTTGGAGGAAGTATGGACAGAAACCGATCAAAGGATCCCCTCATCCAAGGGGTTACTACAAGTGCAGTAGCGTGAGAGGTTGTCCGGCGCGAAAGCATGTGGAGCGAGCTTTGGATGATCCGGCTATGCTGGTGGTAACCTACGAGGGGGAGCACAGTCACACTCTCTCCGCGGCCGATGCCACTAACCTTATTCTTGAATCATCTTGA 954 0.5577 MAVELMTGYRTTTFTTKAEENAVQEAASGLESVEKLIRILSQTPQQYNSSNQIAIDCKAVADLAVSKFKNVISLLGPGPTPTPAPTGHARFRRAPLPPPPSPPSTQPSQPPVFHATPLHQIPKTDGTLNDSSSKTIYFSYPSPATSFISSLTADAHTKQPSSSSPPPPAPGSFHITTLSHVSSAGKPPLSSSSSFKRKCSSENLPSGKCGSSSSRCHCSKKSRKMRLKKVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPAMLVVTYEGEHSHTLSAADATNLILESS 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01633 317 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 23 309 IPR044810 GO:0003700
Vian1g01633 317 SMART WRKY_cls 244 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian1g01633 317 MobiDBLite consensus disorder prediction 92 110 - -
Vian1g01633 317 MobiDBLite consensus disorder prediction 153 197 - -
Vian1g01633 317 MobiDBLite consensus disorder prediction 74 129 - -
Vian1g01633 317 MobiDBLite consensus disorder prediction 175 197 - -
Vian1g01633 317 Pfam Plant zinc cluster domain 196 242 IPR018872 -
Vian1g01633 317 Pfam WRKY DNA -binding domain 246 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian1g01633 317 ProSiteProfiles WRKY domain profile. 239 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian1g01633 317 FunFam WRKY transcription factor 65 228 305 - -
Vian1g01633 317 SUPERFAMILY WRKY DNA-binding domain 241 304 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian1g01633 317 Gene3D WRKY domain 230 305 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01633 Vian-Chr1 18577138 18578419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01633 19 302 WRKY Transcription Factor Family AT2G24570 46.815 1.76e-73 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vian1g01633 WRKY 1.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01633 - - vum:124838807 463.766