Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01619 ATGGCGACTGTTCAGCTCTGTGTGGCACTTCTTTTCCTTCTTCAGCTCTCATCGCTGCAGTTCGCTTCACTGGGCTACAACGTCCCAGATAAGTACTTCATAAATTGTGGGTCAGACAACAGTGTCACCGAAAGTGGAAAGGTCTACGTTGGTGAATCAACACCTCAAGCCACTTTTAGCAGCAGTAACACAGAAAGGAACCAGTCATCGGTACCTTCTCCTCTTTACCAAACAGCAAGGATTTTTCGAAGGGAATCTTGGTATAAGTTCAACATCGATAATAATGGCACCTACCTGGTACGCCTCCATTTCTTCCCTTTCTCTTCTCCCACTAATCTTTCCTCTGCCAGCTTCAACGTTTCAGTTCCTGGCTTTTGGTTGTTGCAAAATTTTAATGGTAGAAATGATACCAATAACAACTCTGCTTTAGTAAAAGAGTTTTTCATGGAAATCAGTACCCCCAGCATAAAAATAACTTTCAGACCTCTGGAATCATCGTTTGCGTTTGTGAATGCCATAGAACTGTTCGTACTTCCGCTCCATCTGATATCCAACGATGTGTCGCGTTTCACTCCGATTGGGGGTACATCTAACTTCAGCGAGGGTTTGTACTCTCGGGTGTTGGAGACCAAACACAGACTTAATGTTGGAGGCCAAACTACCAGAGATATCTTATTAAGAAACTGGATTCCAGATGATATATATCTCACTTATCCTGAAAACGCCAAGAATCGTACCCCTTACCAGGCTCATATCGTGCCCCGTGTAGGTGATGACTCCGATAGTCCAAACGCAACTAGTTATACTGCGCCATCTGAGGTGTACGGGACTGCTAAGGAGTCTAAGAACATCTCTGACAATGCCACAGACTTGGGACTTTTCAACCTGACATGGGCTCTTCCGGTGGACAACAACACAGATAATTTCCTTCGGCTTCACTTCTGTGACTATGTCAGTGCACAAGTTGGCCTTACATACTTCGAACTTTCCATTTATGACTTTCATGTCATGCAGGTAAATAGTGACGAAAACGTGTCTAAGGAGTTGCCTGCCCCTTATTATTATGATTTCGTGGTGAGCTCTGACAACTCTGGATATATTAAGGTCAGCCTAACACCTAATGGAACCGCTGCCATACCAAATACCTTTTTAAACGGGCTGGAAATAATGAAAGTGATTGAATCATCAAATTCTGTCCCCCCTGAGTTGGACGAAAACGGTTCTGGGCATAATCTTCTTCCTGTGTTGCTTGGTTCAGTTCTCGGTGGTTTAGTCTTGGTTGTTGTTGTGGTGCTACTTGGCTTTCTTTGGCGTTCTAAAATGAGGAAGGAAAAGCCCGTTGAGAATTCGGACTGGTTGCCAATCCCCGTTAATGCTGGAGGGAGTTCTCACAGCAGATTGACTGATATAACCAGTCACGGGTCTCCCCTTCCCAACATAAACCTTGGGCTCAAAATTCCCTTGATTGATCTTCAACTGGCAACTAAGAACTTCCACGCAAGTCAGCTAATTGGCAAGGGTGGTTTTGGCAACGTCTACAAGGGAGTTCTCAAGAATGGCATGACAGTGGCTGTGAAAAGAAGCCAGCCAGGTTCAGGTCAAGGCCTTCCAGAATTTCAGACAGAGATCATGGTTTTGTCTAAGATTCGCCACAAGCACCTTGTTTCCTTAATTGGGTATTGTGATGAGAGGTTCGAGATGATTCTGGTCTATGAATACATGGAAAAAGGGACACTCAGGGACCATTTGTATAATACAAAGTTCCCAAGTCTATCCTGGAAGGTGAGGCTTCAAATATGCATTGATTCTGCCAGGGGTCTTCATTACCTTCACAAAGGAGCATCTGGGGGAATCATTCACCGTGATGTAAAGTCCACAAACATATTGCTTGATGAGAACCATGTTGCTAAAGTTGCTGATTTTGGTCTTTCAAGGTCAGGTCCTGCTGATACTCAACCTCATGTCACCACTGGTGTTAAAGGCACTTTTGGATATCTTGATCCTGAGTATTTCAGGTCGCAACAACTGACAGAAAAATCTGATGTCTATTCATTTGGAGTAGTTCTTTTGGAAGTGTTGTGTGCAAGAGCAGTGATTGATCCATCTCTTCCAAGAGATCAGATAAACTTGGCAGAATGGGGATTGCTTTGCAAAAACAAGGGGATACTCCAAGAGATCATCGATCCTTCCATCAAGGACCAAATTGATCAAAACTCACTCAGAAAATTTAGTGAGACGATAGAAAAATGCTTGCAAGAAGATGGTTCTGATAGGCCATCCATGGGCGATGTGTTGTGGGACTTGGAGTACGCGCTGCAGCTTCAGAAAGGTGCAAATGCAATACAGAGAGAGCCGTATGAGGATAGTTCTAGTAGTGTTTCTGCATCACTTCAATTGCCCAATGTTCGGCGTCTTCCTTCACTCTCCACACTGAGTGAAGCGGATGATACCATTGTGAGGGGTGATGAATCCGATAGTGTTGTGGATTCGGTTTTCTCCCAGTTGAAGATTGATGATGCCAGATAG 2526 0.4414 MATVQLCVALLFLLQLSSLQFASLGYNVPDKYFINCGSDNSVTESGKVYVGESTPQATFSSSNTERNQSSVPSPLYQTARIFRRESWYKFNIDNNGTYLVRLHFFPFSSPTNLSSASFNVSVPGFWLLQNFNGRNDTNNNSALVKEFFMEISTPSIKITFRPLESSFAFVNAIELFVLPLHLISNDVSRFTPIGGTSNFSEGLYSRVLETKHRLNVGGQTTRDILLRNWIPDDIYLTYPENAKNRTPYQAHIVPRVGDDSDSPNATSYTAPSEVYGTAKESKNISDNATDLGLFNLTWALPVDNNTDNFLRLHFCDYVSAQVGLTYFELSIYDFHVMQVNSDENVSKELPAPYYYDFVVSSDNSGYIKVSLTPNGTAAIPNTFLNGLEIMKVIESSNSVPPELDENGSGHNLLPVLLGSVLGGLVLVVVVVLLGFLWRSKMRKEKPVENSDWLPIPVNAGGSSHSRLTDITSHGSPLPNINLGLKIPLIDLQLATKNFHASQLIGKGGFGNVYKGVLKNGMTVAVKRSQPGSGQGLPEFQTEIMVLSKIRHKHLVSLIGYCDERFEMILVYEYMEKGTLRDHLYNTKFPSLSWKVRLQICIDSARGLHYLHKGASGGIIHRDVKSTNILLDENHVAKVADFGLSRSGPADTQPHVTTGVKGTFGYLDPEYFRSQQLTEKSDVYSFGVVLLEVLCARAVIDPSLPRDQINLAEWGLLCKNKGILQEIIDPSIKDQIDQNSLRKFSETIEKCLQEDGSDRPSMGDVLWDLEYALQLQKGANAIQREPYEDSSSSVSASLQLPNVRRLPSLSTLSEADDTIVRGDESDSVVDSVFSQLKIDDAR 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01619 841 Gene3D Transferase(Phosphotransferase) domain 1 574 793 - -
Vian1g01619 841 SUPERFAMILY Protein kinase-like (PK-like) 475 769 IPR011009 -
Vian1g01619 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Vian1g01619 841 ProSiteProfiles Protein kinase domain profile. 498 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g01619 841 SMART serkin_6 498 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g01619 841 FunFam Putative receptor-like protein kinase 206 393 - -
Vian1g01619 841 FunFam receptor-like protein kinase FERONIA 463 573 - -
Vian1g01619 841 Pfam Protein tyrosine and serine/threonine kinase 500 765 IPR001245 GO:0004672|GO:0006468
Vian1g01619 841 PANTHER OS07G0166700 PROTEIN 485 775 IPR045272 GO:0004714|GO:0006468
Vian1g01619 841 CDD STKc_IRAK 504 769 - -
Vian1g01619 841 ProSitePatterns Protein kinases ATP-binding region signature. 504 526 IPR017441 GO:0005524
Vian1g01619 841 FunFam Putative receptor-like protein kinase 31 179 - -
Vian1g01619 841 FunFam Receptor-like protein kinase FERONIA 574 791 - -
Vian1g01619 841 Pfam Malectin-like domain 34 392 IPR024788 -
Vian1g01619 841 Gene3D Phosphorylase Kinase; domain 1 466 573 - -
Vian1g01619 841 Gene3D - 31 177 - -
Vian1g01619 841 Gene3D - 208 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01619 Vian-Chr1 18334758 18342823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01619 3 841 Receptor kinase-like Gene Family AT2G23200 44.213 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vian1g01619 Malectin_like 2.8e-27 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01619 - - gmx:100789555 1144.03