Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01566 ATGGCGGCTTTGTCTTCCACATCCCTTCCAAACCTTCCCAAATTTTCATCCCACAAATTCAATTTCCACCCACAACAGCTACTCAATTTACGCCCTCGCTCCCCAAAATCGAAGCCAAACAACCCCTTATTTTTTACCAGAGTCCCAACCTCTACATGCGAGCGCTGCAACGTGTTCAGCGAGGAACTGATCGGAAGCGTGGCGGAGGAGGAGGGTTACAGCAGCTCCATGGACGATAGGCAATTTGTGCGTTGGTTCCGTGAGACGTGGCCGTACTTGAGGGTCCACCGTGGTGCGACCTTCGTTGTCATCGTTTCCGGTGAAATTGTTGCTAGTCGTTACTTGGATCCCATTCTCAAGGCACCTCCAAATATTTCATTTCTTTTTATTTTACTGGATATAGCCTTTCTTCATCACCTGGGAATCCGGTTTGTTCTTGTTCCGGGGACCCATATGCAAATTGACAATCTTTTGCGTGAGAGAGGGAGAGAACCTAAGTATGTTGGTCCATATAGGGTAACTGATGATGAGTCTCTAGCAGCTGCAATGGAAGCAGCTGGGAGAATAAGATTGATGATTGAAGCGAAGCTTTCTCCTGGACCCTCCATTTGCAATATTCGTCGACATGGTGACAATAGCCGTTTGCATGAAGTTGGTGTCAGTGTTGCAAGTGGAAACTTTCTTGCAGCCAAGAGAAGAGGGGTTGTCAAAGGAGTTGATTTTGGGTCAACTGGGGAGGTTAAAAAAGTAGACGTTTCTCGCATGCGTGAGAGGCTTGATGGCAACTGCATTGTTATTTTAAGCAACTTGGGTTACTCCAGCTCTGGAGAAGTATTAGATTGCAAAAAGCCTCAATATTTTATGTTGTTCATATTTTCAATTGGGAGGTTAGCCATGGACCAACCGGGAGGCTGTTGCCTCGTGGCTAGGTCAAAGGTTCTAGTTGTTGTTCAGCCTCTGCTCTCAAGTGATACCTATGAAGTTGCAACAGCTTGTGCGTTGGCAATAGGAGCAGACAAGCTTATATGCATTATGGATGGTCCGATCCTGGATGAAAGTGGACACCTCATTCGCTTCTTGACTCTTCAAGAGGCAGACATGCTAATCCGTAAACGGGTTGAACAAAGTGAAACAGCTGCTAACTATGTCAAAGCTGTTGCGGAAGAAAGTTTCAACACACTTAATAAATTTAATGGGGATCCGCGGAATGGAAATCCGTTTTCAGGACTTCATATTGCAACCTTCCATAATGGTGTTGGTTTTGACAGTGGGAATGGCCTTTGGTCTGGGGAGCAGGGTTTTGCTATAGGAGGTCAGGAGTCCCTAAGTCGGACGAGTGGTTACCTGTCAGAGCTAGCTGCAGCAGCTTTCGTTTGCAGAGGCGGTGTTCAAAGAGTTCATTTGTTGGATGGCACTATTAGTGGAGTTCTATTGTTGGAATTGTTCAAGAGAGATGGGATGGGGACAATGGTGGCTAGTGACCTTTATGAAGGCACCCGGATGGCTCAAGGAACAGATATTTCTGGAATTAAACAACTTATCCAGCCTTTACAGGAGTCTGGCATATTAGTTATGCGGACTGATGAAGAGCTGCTTCAATCGTTAGGGTCCTTCATTGTTGTGGAAAGAGAAGGTCAAATAATTGCTTGCGCTGCACTTTTTCCTTTCTTTGAAGAGAAGTGTGGAGAGGTTGCTGCAATTGCAGTATCCCCTGATTGTAGAGGCCAAGGACAGGGAGACAAATTACTCGATTATATAGAGAAGAAGGCATCATATCTTGGATTTGAAATGCTTTTCTTGCTTACAACTCGTACAGCAGATTGGTTTGTGAGACGTGGATTTTCAGAATGTTCAATTGATTTTATTCCTGAGAAGAAAAGGAAAAAGATTAATCTATCCCGCAAGTCCAAGTATTACAGGAAGAAGCTTCTACCTAATAAGAGTGGAATTACTTTTGGTAGCAATTTTTCTTCCCATTAG 1980 0.446 MAALSSTSLPNLPKFSSHKFNFHPQQLLNLRPRSPKSKPNNPLFFTRVPTSTCERCNVFSEELIGSVAEEEGYSSSMDDRQFVRWFRETWPYLRVHRGATFVVIVSGEIVASRYLDPILKAPPNISFLFILLDIAFLHHLGIRFVLVPGTHMQIDNLLRERGREPKYVGPYRVTDDESLAAAMEAAGRIRLMIEAKLSPGPSICNIRRHGDNSRLHEVGVSVASGNFLAAKRRGVVKGVDFGSTGEVKKVDVSRMRERLDGNCIVILSNLGYSSSGEVLDCKKPQYFMLFIFSIGRLAMDQPGGCCLVARSKVLVVVQPLLSSDTYEVATACALAIGADKLICIMDGPILDESGHLIRFLTLQEADMLIRKRVEQSETAANYVKAVAEESFNTLNKFNGDPRNGNPFSGLHIATFHNGVGFDSGNGLWSGEQGFAIGGQESLSRTSGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQGTDISGIKQLIQPLQESGILVMRTDEELLQSLGSFIVVEREGQIIACAALFPFFEEKCGEVAAIAVSPDCRGQGQGDKLLDYIEKKASYLGFEMLFLLTTRTADWFVRRGFSECSIDFIPEKKRKKINLSRKSKYYRKKLLPNKSGITFGSNFSSH 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01566 659 NCBIfam amino-acid N-acetyltransferase 452 643 IPR010167 GO:0004042|GO:0005737|GO:0006526
Vian1g01566 659 Gene3D - 303 494 IPR036393 -
Vian1g01566 659 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 493 645 IPR000182 GO:0016747
Vian1g01566 659 Hamap Amino-acid acetyltransferase [argA]. 75 643 IPR010167 GO:0004042|GO:0005737|GO:0006526
Vian1g01566 659 CDD AAK_NAGS-ABP 81 491 IPR033719 -
Vian1g01566 659 PANTHER AMINO-ACID ACETYLTRANSFERASE 322 651 IPR010167 GO:0004042|GO:0005737|GO:0006526
Vian1g01566 659 SUPERFAMILY Carbamate kinase-like 313 493 IPR036393 -
Vian1g01566 659 Pfam Acetyltransferase (GNAT) family 536 600 IPR000182 GO:0016747
Vian1g01566 659 CDD NAT_SF 538 600 - -
Vian1g01566 659 Gene3D - 80 286 IPR036393 -
Vian1g01566 659 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 501 646 IPR016181 -
Vian1g01566 659 Gene3D - 496 643 - -
Vian1g01566 659 SUPERFAMILY Carbamate kinase-like 77 279 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01566 Vian-Chr1 17664607 17671413 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vian1g01566 Acetyltransf_1 1.9e-09 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01566 K14682 - gmx:100800925 988.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00503 10 4722697 4730353 Vian1g01566 1 17664607 17671413 PCT