Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01554 ATGCTCACCACCCTCCCTCCCTCCGAACCCTTCGTGGGCAACCCATTCTCCGCCTTTTCTGTAGACTTCACCGCCTGGGAGGACGACTCCCACCACCTCCTCTCCCCGAAACCCGTCACTTCCAGCTCCGGCTCCGACAAACCGGAGCCGGAGCCAGCTGAACCGGACCAACCCGTGGTCTCGGTGGTGGACGAGCGGAAACTTCGGCGCATGATATCGAACCGCGAATCTGCCCGCAGGTCTCGCATGCGAAAACAGAGACACCTGGAGAACCTTCGGAACCAGTTGAACAAGTGCAGGGTCGAAAACCGGGAACTGAATAACCGGTTGCAGTTCGTCCTGCACCACTGTAACCGCCTCCGAACCGAAAACGAATGGCTCCGGTCCCAGCGAACCCTCCTCCTCCAAAAAGTCGCCAACTTAACCCAAATTTTGATTTTCCAACAATTCCAACAACCCATCTCCCCTGCATGGACATGCAACACTTCGCTCATCCCAATTAATCAAGTTAATTAA 516 0.5562 MLTTLPPSEPFVGNPFSAFSVDFTAWEDDSHHLLSPKPVTSSSGSDKPEPEPAEPDQPVVSVVDERKLRRMISNRESARRSRMRKQRHLENLRNQLNKCRVENRELNNRLQFVLHHCNRLRTENEWLRSQRTLLLQKVANLTQILIFQQFQQPISPAWTCNTSLIPINQVN 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01554 171 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 64 127 IPR004827 GO:0003700|GO:0006355
Vian1g01554 171 PANTHER BZIP TRANSCRIPTION FACTOR 44 40 148 - -
Vian1g01554 171 FunFam BZIP transcription factor 64 115 - -
Vian1g01554 171 CDD bZIP_plant_GBF1 67 118 IPR045314 GO:0003700|GO:0006355
Vian1g01554 171 Gene3D - 64 116 - -
Vian1g01554 171 Pfam bZIP transcription factor 66 125 IPR004827 GO:0003700|GO:0006355
Vian1g01554 171 Coils Coil 75 109 - -
Vian1g01554 171 SMART brlzneu 62 126 IPR004827 GO:0003700|GO:0006355
Vian1g01554 171 MobiDBLite consensus disorder prediction 31 60 - -
Vian1g01554 171 SUPERFAMILY Leucine zipper domain 66 118 IPR046347 GO:0003700|GO:0006355
Vian1g01554 171 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 69 84 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01554 Vian-Chr1 17492343 17492858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01554 1 149 bZIP Transcription Factor Family AT3G49760 39.623 1.98e-29 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian1g01554 bZIP_1 1.3e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01554 - - gmx:100809244 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00492 10 4615354 4615878 Vian1g01554 1 17492343 17492858 PCT