Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01527 ATGGCTGGTTTGGATTTAGGAAGCGCTTCACGCTTTGTTCAAAACCTTCACAGACCGGACTTGCACTTGCAGCAACTCCATCACGATTCTGAGGACCAAGAGACGCCGCCACACAACCGCGGAGGGGTGCCGTTCGATGACGATGACCGAAGCCAAGGATTGGAACTAGCTTCCTCGGGTCCCGGTGATATTCAGGCACCCCCTACGACGTCGTCTCACGGAGTTGGAAATAACAACGGCAACAATAGCAATAACAACTCTTTCCCTGACCCTTCTTCGGGACTTCCCTTCTTCAATTTACCTCTGAATATGCAGAACGTTCAGTTACCCGGTGAGGGTTGGGGGGGAAACGCTGCTTCACGTCCACCACCTTTTTGA 378 0.5238 MAGLDLGSASRFVQNLHRPDLHLQQLHHDSEDQETPPHNRGGVPFDDDDRSQGLELASSGPGDIQAPPTTSSHGVGNNNGNNSNNNSFPDPSSGLPFFNLPLNMQNVQLPGEGWGGNAASRPPPF 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01527 125 MobiDBLite consensus disorder prediction 63 99 - -
Vian1g01527 125 MobiDBLite consensus disorder prediction 21 53 - -
Vian1g01527 125 MobiDBLite consensus disorder prediction 16 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01527 Vian-Chr1 16942715 16943572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01527 1 57 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 52.459 5.23e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01527 - - pvu:PHAVU_003G230600g 120.938