Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01511 ATGGGTTGCCTACACTCCAAAACCGCTCATCTTCACTCTCCTGAAGACCCTCCCACTGCCTTGCCAGACTCAAAAAAACCCGATCCAGGGAATGGTGGGGATGATGTTGATCAAGAGGTTCAGGTTCCAGCATTCAAAGAGTACGGTCTGAGTGAACTTCGAAGGGCCACAAATGAGTTCAACACAGATTACATTGTTTCTGAGAGTGGGGAGAAAGCCCCCAATGTGGTATACAGAGGGAAGCTAGAGAACAATCGTTTAGTTGCTGTGAAGCGGTTCTCAAAACTGTCTTGGCCTGATGCTCAACAGTTTATGGCAGAGGCAGCTGGAGTTGGGAAAGTGAGGCACAAAAGACTGGTGAATCTAATTGGCTGTTGTGCTGAAGGAGATGAAAGGCTCTTGGTAGCTGAGTACATGCCAAATGACACTTTGTCCAAACATCTCTTTCATTGGGACAAGCAACCATTACCATGGGAAATGCGTGTAAGAGTTGCGTACCATGTTGCGCAGGCACTAGATCATTGCAGCATGGAAAACCGGAAAATATATCATGATCTGAATGCATATAGGATTCTTTTTGATGAGTTTTCTGCTTTGGATGGTGATCCCCGCTTGTCTAGTTTTGGGCTTATGAAAAATAGTCGAGACGGGAAAAGCTACAGTACCAATTTAGCTTACACTCCACCTGAATTTTTGAGAACAGGCAGGATAATCCCGGAGAGTGTGATCTACAGTTATGGAACTGTTCTTCTGGATCTTTTAAGTGGCAAGCATATTCCTCCTAGCCATGCTTTGGACCTGATTAGAGGGAAGAATGTTTTGTTGTTGATGGACTCTTCCCTCGAAGGGCAATATGCGAATGATGATGCTACAAAGTTGGTTGAGCTTGCTTCAAAATGTCTTCAGTTTGAGGCCAGAGAACGACCTGAAATTAAGTTTCTTCTTACTTCCGTTACACCTCTTCAGAAGCAAAAAGAGGTAGCATCTCATGTGTTGATGGGCCTAACTAAAAACACAGCAGTGCTACCAACCATGCTTTCTCCCCTTGGAAAGGCTTGTGCAAGAATGGATCTCACTGCTGTGCATGATATATTGTTAAAAACAGGTTATAAAGATGAAGAAGGAGCAGAAAATGAGCTTTCATTCCAAGAATGGACACAGCAAGTGCAAGATATATTGAACACTAAAAAGTTTGGGGATATTGCATTCAGGGACAAGGATTTCAAAAATGCTATTGAGTACTATTCTAAGTTGGTGGTTATGATGTCTGTTCCTTCTGCTACTGTGTTTGCAAGGAGAGCCTTCTCCTACTTGATGAATGATCAAGCAGAACTTGCATTAAGGGATGCCATGCAGGCACAGGTATGCATACCTGATTGGCCAACTGCGTTCTATCTGCAGGCTCTGGCTCTCTCGAAGCTGGGAATGGAAACTGATGCACATGACATGCTCAATGATGGGGCTGCTTTTGAAGCAAAGAGGTCTAACAGCTGGCGTGGTTAA 1503 0.4405 MGCLHSKTAHLHSPEDPPTALPDSKKPDPGNGGDDVDQEVQVPAFKEYGLSELRRATNEFNTDYIVSESGEKAPNVVYRGKLENNRLVAVKRFSKLSWPDAQQFMAEAAGVGKVRHKRLVNLIGCCAEGDERLLVAEYMPNDTLSKHLFHWDKQPLPWEMRVRVAYHVAQALDHCSMENRKIYHDLNAYRILFDEFSALDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRIIPESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNVLLLMDSSLEGQYANDDATKLVELASKCLQFEARERPEIKFLLTSVTPLQKQKEVASHVLMGLTKNTAVLPTMLSPLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDILNTKKFGDIAFRDKDFKNAIEYYSKLVVMMSVPSATVFARRAFSYLMNDQAELALRDAMQAQVCIPDWPTAFYLQALALSKLGMETDAHDMLNDGAAFEAKRSNSWRG 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01511 500 Gene3D Phosphorylase Kinase; domain 1 34 138 - -
Vian1g01511 500 ProSiteProfiles Protein kinase domain profile. 63 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g01511 500 FunFam probable serine/threonine-protein kinase At5g41260 140 335 - -
Vian1g01511 500 FunFam probable serine/threonine-protein kinase At4g35230 35 138 - -
Vian1g01511 500 MobiDBLite consensus disorder prediction 1 38 - -
Vian1g01511 500 Gene3D Transferase(Phosphotransferase) domain 1 140 336 - -
Vian1g01511 500 SUPERFAMILY Protein kinase-like (PK-like) 51 319 IPR011009 -
Vian1g01511 500 Gene3D Tetratricopeptide repeat domain 390 499 IPR011990 GO:0005515
Vian1g01511 500 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 34 495 IPR045845 GO:0004672|GO:0009742
Vian1g01511 500 SUPERFAMILY TPR-like 391 489 IPR011990 GO:0005515
Vian1g01511 500 Pfam Protein tyrosine and serine/threonine kinase 76 315 IPR001245 GO:0004672|GO:0006468
Vian1g01511 500 FunFam probable serine/threonine-protein kinase At4g35230 390 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01511 Vian-Chr1 16775540 16780210 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01511 14 318 Glycoside Hydrolase AT3G07070 33.939 1.61e-40 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Vian1g01511 PK_Tyr_Ser-Thr 3.9e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01511 K14500 - gmx:100793576 985.326