Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01484 ATGAAGTGTTTCTTCTTCAAAGACAAGTGTAAATCCGCCCCCGAATTGCATAAGAAGAAAAACCCCGCCGTGAACCGCGCCGCGAACTCCACCGGCTCCCTATCGTCGCCCAAGAGCGTGAAGGACTTGTACAGAGAGAAAGAGCACAGCTTCAGAGTTTTCAATTTTCAGGAGCTCAGAGATGCCACCCAAGGTTTCAATAGGACGCTCAAGCTTGGAGAAGGGGGGTTCGGGAGTGTGTATAAAGGATCCATCAGACCCTCCGATGGCCAGGGTGATCCATTTCCAGTAGCTATCAAAAGGCTCAACACGCGTGGCTTCCAGGGTCATAAAGAATGGCTTGCTGAAGTTCAATTTCTTGGCATTGTTAATCACCCAAATTTGGTTAAGCTTTTGGGATACTGCTCCATGGACGGAGAAAGAGGAATCCAACGGCTGCTGGTGTACGAGTTCATGCCCAACGGGAGCTTGGAGGATCACCTCTTCAATAAAAGTTTACCACCTCTCCCTTGGAAAACAAGATTGGAGATTATGCTTGGTGCCGCCCAAGGATTAGCTTATCTCCATGAAGGACTGGAAATTCAGGTGATCTACAGAGACTTCAAATCTTCAAATGTTCTATTGGATGCGGATTTCCATCCAAAGCTCTCAGATTTTGGTCTTGCTAGAGAAGGACCACAAGGCGATCAGACTCATGTATCCACTGCGGTGGTTGGGACACAGGGGTATGCTGCACCAGAGTACATTGAAACGGGTCATCTGAAAGTTCAGAGCGACATGTGGAGTTTTGGTGTAGTGCTGTATGAGATCCTCACAGGAAGAAGATCATTGGAAAGAAACCGTCCCACTGCAGAACAAAAGCTTCTAGATTGGGTGAAACAGTATCCTGCTGACACCAGCAGGTTCGTGGTGATAATGGATCCTCGTCTCAGGAACCAGTATTCTCCCCAAGCAGCTCGCAAAATAGCCAAGTTGGCTGATAGCTGCTTAAAGAAGAATCCAGAAGATAGACCATCCATGAGTCAGATAGTGGAAGCCTTGAAGCAAGCCTTGCAACATTCTGAAATTCCAAACTCTTCTCAAGACATTGCTGAATCCTCCTCATCCCGGTCTAAACTGGTCAGAAAAAGTAAACAGTGA 1140 0.4719 MKCFFFKDKCKSAPELHKKKNPAVNRAANSTGSLSSPKSVKDLYREKEHSFRVFNFQELRDATQGFNRTLKLGEGGFGSVYKGSIRPSDGQGDPFPVAIKRLNTRGFQGHKEWLAEVQFLGIVNHPNLVKLLGYCSMDGERGIQRLLVYEFMPNGSLEDHLFNKSLPPLPWKTRLEIMLGAAQGLAYLHEGLEIQVIYRDFKSSNVLLDADFHPKLSDFGLAREGPQGDQTHVSTAVVGTQGYAAPEYIETGHLKVQSDMWSFGVVLYEILTGRRSLERNRPTAEQKLLDWVKQYPADTSRFVVIMDPRLRNQYSPQAARKIAKLADSCLKKNPEDRPSMSQIVEALKQALQHSEIPNSSQDIAESSSSRSKLVRKSKQ 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01484 379 PANTHER OS01G0588500 PROTEIN-RELATED 36 352 - -
Vian1g01484 379 Gene3D Transferase(Phosphotransferase) domain 1 152 373 - -
Vian1g01484 379 MobiDBLite consensus disorder prediction 354 370 - -
Vian1g01484 379 ProSitePatterns Protein kinases ATP-binding region signature. 72 100 IPR017441 GO:0005524
Vian1g01484 379 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 152 361 - -
Vian1g01484 379 ProSiteProfiles Protein kinase domain profile. 66 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g01484 379 Gene3D Phosphorylase Kinase; domain 1 46 151 - -
Vian1g01484 379 Pfam Protein tyrosine and serine/threonine kinase 70 347 IPR001245 GO:0004672|GO:0006468
Vian1g01484 379 MobiDBLite consensus disorder prediction 354 379 - -
Vian1g01484 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Vian1g01484 379 CDD STKc_IRAK 72 349 - -
Vian1g01484 379 SUPERFAMILY Protein kinase-like (PK-like) 48 347 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01484 Vian-Chr1 16414395 16416540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01484 3 347 Glycoside Hydrolase AT3G07070 43.137 8.78e-93 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Vian1g01484 PK_Tyr_Ser-Thr 2.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01484 - - gmx:100305403 675.626