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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vian1g01463
ATGGGCAAGCAAGGGCCTTGCTATCACTGTGGAGTTACAAGCACACCACTTTGGCGTAACGGACCACCTGAGAAGCCTGTACTATGCAATGCATGTGGATCTCGATGGAGGACTAAGGGAACACTTGCAAATTATACCCCTTTGCATGCACGGGCAGAAAATGCTGATTATGAGGATCAAAAAGTTTCCAGGGTAAAAAGCATATCACTAAATAAGAACAAAGAAGTGAAATTGGTCAAGAGAAAGCAGAACTATGATAATGCTGCATCTGGAGGGTTCGTTCCAGATTATAATCAAGGACACCTAAAGGTTGTGGATGAAGATACAAGCAACAGATCAAGCTCAGGGTCAGCTATTTCTAACTCGGAGAGCTGTGCTCAATTTGGTGGCACAGATGCTAGTGATTTGACAGGTCCTGCAATGTCAGTGGTCTGGGATGCCATGGTGCCTTCTAAAAAGAGAACATGTTCAGGTCGTCCAAAGCCTTCATCTGTTGAGAAGCTCACAAGAGACCTGTGTACTATTCTTCATGAACAACAGTCTTGTTTCTCTGCATCTTCTGAAGAGGATCTTCTTTTGGAAAGTGACACACCAATGGTCTCTGTTGAGATAGGACATGGAAGCATTCTCATCAGGCATCCTAGCTCTATAGCTCGTGATGAAGAGTCCGAGGCCAGCTCTCTTTCAGTTGATAATAAACAATGCCTAATGAATGAAGCATATTCATTCTCTAGTACGATTCCTTTGTATAGTAGTGATCACAGTGGCATGAACTTTTCATCTCAAGGAATTGAAAAGATAGAAAACTCAGCTGGCCAAATCATGCAACAAGAGAAACTTGAAAGGCATGTTTTCCTCAGCAGTTTACAGTCTTTCATTATTCTAGTCAGTTATGCAGAAACAATGGACAAGTCTCAGCTTGAAAAACAAGTTCCTGGAAATCACAATTCACTGTTGTGCTCAATAGATTTAAATGATGTGGTGAACTATGAGGAGTTTATGAGGAACTTGACAAATGAAGAGCAGCAGCAATTACTAAAGTATCTTCCTGTGGTTGATACTTCTAATTTTATTGATAGCCTTAAAAACATGTTCAGTAGCTTCCAATTCAAGGAGAACTTGACTTATTTTCAGCAACTTCTTGGGGAAGGTGTCTTTGACATCTCTTTGTTGGGGACAAAACCTGAAGAATGGAAGACATTGAAAAGGCTTGTGTTATCTAATATGTCAAAATCAAAATGGGTAGAACACTATAATTTTCTCAAGAAATGTGAAAACAAAGCTGGAAAAACTAATGGTCCAGGATCTACTGCTATGGAATCAAGTAATATTACAAATGCCAAGAGAATACGTGAGCATGACAGCCAAAATCAAAATTTTGCAGAATTGAAGACAACAATGAGGAGCCCCATAAGGGTGATTATAAATCCTGTATGTGAAGGCAAAGAAGTTGTAGAAGAAGGCTCAAGCTTCAGCCCAGAAAGCCTTTTTTCTTTGCCACATGGTGTTGGTGGCTTGCACATGTTGGATTCTTTTAACTATGTTGGTGAGAGTTCTGAGGATCTGCTGTTAGATGTGCCTTCTAACAGTTCTTTTCCGCAGGCAGAGCTCCTGCTCCCAACTTTAAGCTATGGTGCTAAGGTCTGCACCACTAGTAGCTCAGTACACTCAACTGTTACTCATCATCCTTAA
1692
0.4072
MGKQGPCYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARAENADYEDQKVSRVKSISLNKNKEVKLVKRKQNYDNAASGGFVPDYNQGHLKVVDEDTSNRSSSGSAISNSESCAQFGGTDASDLTGPAMSVVWDAMVPSKKRTCSGRPKPSSVEKLTRDLCTILHEQQSCFSASSEEDLLLESDTPMVSVEIGHGSILIRHPSSIARDEESEASSLSVDNKQCLMNEAYSFSSTIPLYSSDHSGMNFSSQGIEKIENSAGQIMQQEKLERHVFLSSLQSFIILVSYAETMDKSQLEKQVPGNHNSLLCSIDLNDVVNYEEFMRNLTNEEQQQLLKYLPVVDTSNFIDSLKNMFSSFQFKENLTYFQQLLGEGVFDISLLGTKPEEWKTLKRLVLSNMSKSKWVEHYNFLKKCENKAGKTNGPGSTAMESSNITNAKRIREHDSQNQNFAELKTTMRSPIRVIINPVCEGKEVVEEGSSFSPESLFSLPHGVGGLHMLDSFNYVGESSEDLLLDVPSNSSFPQAELLLPTLSYGAKVCTTSSSVHSTVTHHP
563
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vian1g01463
563
Gene3D
-
307
410
IPR038108
-
Vian1g01463
563
Pfam
Asx homology domain
302
395
IPR028020
-
Vian1g01463
563
ProSiteProfiles
GATA-type zinc finger domain profile.
7
40
IPR000679
GO:0006355|GO:0043565
Vian1g01463
563
PANTHER
OSJNBB0038F03.10 PROTEIN
1
550
IPR044589
-
Vian1g01463
563
SUPERFAMILY
Glucocorticoid receptor-like (DNA-binding domain)
5
45
-
-
Vian1g01463
563
SMART
GATA_3
1
53
IPR000679
GO:0006355|GO:0043565
Vian1g01463
563
CDD
ZnF_GATA
6
54
IPR000679
GO:0006355|GO:0043565
Vian1g01463
563
ProSiteProfiles
DEUBAD (DEUBiquitinase ADaptor) domain profile.
315
427
IPR044867
-
Vian1g01463
563
Gene3D
-
3
86
IPR013088
GO:0006355|GO:0008270
Vian1g01463
563
Pfam
GATA zinc finger
7
41
IPR000679
GO:0006355|GO:0043565
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vian1g01463
Vian-Chr1
16140965
16146146
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vian1g01463
1
538
C2C2-Gata Transcription Factor Family
AT4G17570
49.374
1.77e-144
425
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
C2C2-GATA
Vian1g01463
ASXH
5.4e-08
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vian1g01463
-
-
vum:124834311
1019.61
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Vian10g00419
10
3766535
3771416
Vian1g01463
1
16140965
16146146
PCT
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