Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01381 ATGGTCAGAAAGTCACAGAAGAATTCCACTTGTGTAGTCTTAAAATTGGTGTGGTGTTTTAGACAAGGAACTAATAAACTCTGTTTATCAAAGTATGGTCGATCAACAGATCTACCAAAGGGACATTTGACAGTGTGTGTAGGCGAATCGGAAGATGAGAAACAACGTGTTTTGGTGCCAGTTACTCATTTCAATCACCCCCTTCTTGGAAAACTATTGGAAGATGCAGAGAAAGTTTACGGGTTCGATTATCCAGGTGTAATTACCATACCCTGCACACTCTCTGAGTTCCAGAGAGTTCAGAACATCATTGCCACCACTCCAAGCTACCACACCTCCCTTACAATTTCTTGTTCCATCAACTGA 366 0.4153 MVRKSQKNSTCVVLKLVWCFRQGTNKLCLSKYGRSTDLPKGHLTVCVGESEDEKQRVLVPVTHFNHPLLGKLLEDAEKVYGFDYPGVITIPCTLSEFQRVQNIIATTPSYHTSLTISCSIN 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01381 121 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 28 99 IPR003676 GO:0009733
Vian1g01381 121 Pfam Auxin responsive protein 33 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01381 Vian-Chr1 15066881 15067246 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01381 36 113 Calmodulin-binding Proteins AT4G34750 38.462 1.18e-13 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01381 K14488 - gmx:102668727 169.088