Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01353 ATGGAGATGGAGAGGTACACCAGTCAGCGGTGGAAACCTACTGATGATCAGGTCAAAATGATGACCAATATCTTCAACCACGGGGTCACACATCCCAGCAGAGCCCAAGTTGTCGAGATTGCATCTCGAATCAGGGCCTTCGGAGAGGTCAGTGAATATAATGTACACTGCTGGTTCAACAATCATGGTAACCGGGTCAAGCGCTGGCAAGCGGAATTAGACCCCACTGGCACCGTATTTTCTCAGCTGCCGCTGTACATGTATGAATATGGCTGGGTAATTATGAAGGCGCCAAGGCTGCTGGATTTGTTCCCTGTTCCTATCATCATCGACGATGACAAGGACGAACGACAAATCCCTCAACCCATGCCTCTCGCCTTCCGAACCAGAGCTCCCTCGACAGAGCTCTCCCTCAGACCACCACAACCCGCTCGGGAATTTTTCCATTAA 450 0.5089 MEMERYTSQRWKPTDDQVKMMTNIFNHGVTHPSRAQVVEIASRIRAFGEVSEYNVHCWFNNHGNRVKRWQAELDPTGTVFSQLPLYMYEYGWVIMKAPRLLDLFPVPIIIDDDKDERQIPQPMPLAFRTRAPSTELSLRPPQPAREFFH 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01353 149 ProSiteProfiles 'Homeobox' domain profile. 4 69 IPR001356 GO:0003677
Vian1g01353 149 Pfam Homeodomain 8 68 IPR001356 GO:0003677
Vian1g01353 149 SUPERFAMILY Homeodomain-like 9 70 IPR009057 -
Vian1g01353 149 Gene3D - 8 73 - -
Vian1g01353 149 PANTHER WUSCHEL-RELATED HOMEOBOX 13 7 72 IPR044559 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01353 Vian-Chr1 14704874 14705416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01353 7 72 Wox Gene Family AT5G59340 37.879 5.17e-13 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Vian1g01353 Homeodomain 5.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01353 - K11674 vum:124821070 280.026