Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01340 ATGTTTTCCTCACCATCTATCCTCAAGCAATACACCACCATGCCTCTCTCCTCAATTCTATCTCAAACCCACTATTTCTCTGATCAACCCATAACTACCCTTATTCTCTTCTTCCTCTTCTTCCTAGTTGCGTCCTACCTATTCCTCAAACCCAACCCCCGAAACCTACCGCCGGGTCCACCGGGCCTCCCCTTCTTCGGGAACCTTTTATCTCTTCACCCAGATCTTCACACTTACTTCGCCGCCTTGGCCCAGATACACGGCCCAATTTTCAAACTTCGACTAGGGAGCAAGCTCGCCATCGTCATAACTAAACCCACCCTTGCTCGCGAGGTCCTCAAAGACAACGATATTGTTTTCGCCAACCGCGACGTCCCCGTAGCCGGTAGGATTGCCACCTATGGCGGCACCGACATAGTATGGACCCCGTACGGAGCCGAATGGCGGATGCTGAGGAAAGTGTGCGTGGTGAAGATGTTGAGCAACGTCACCCTAGATTCCGTCTACGATCTGCGGCGCAACGAGGTGTGCAAGATGGTGTCGTATTTGTACGACCGAGCGGGGAGTGCGGTGAACGTGGGGGAGCAGGTGTTTCTAGCGGTGATGAATGTGATAACCAGTATGATGTGGGGCGGGGAGGTGGAAGGGGTGGATAGGGAGATTTTGGGGGCGGAGTTCAGGGAGTTGGTGGCGGAGATGACGCAGCTGCTGGGGAAGCCCAATGTTTCGGACTTTTTTCCCGGGTTGGCCCGGTTCGATTTGCAGGGCGTGGAGAAAGAGATGCAGGCTCTGGTGCCCCGGTTCGATGAGATATTTGAAAGGATGATTGGTGAACGAGTGAAGGTGAATGAAAAAGAAGATGGGAAAAAGAAAGAAAGAAAAGATTTTCTGCAGTTTTTGTTGGATCTTAAGGATTCTGAAGGCCATGATTCAAAGACACCATTCACCATGACCCACCTTAAGGCCCTCCTCATGGATATGGTTGTGGGTGGAACCGATACATCTTCGAACACGATTGAGTTTGCAATGGCAGAAATGATGCAGAAGCCAAATGTAATGAAGAAAGTCCAAGAAGAGTTGGAAGTCGTGGTTGGAAAAGATAGAATGGTAGAAGAGTCTGACATTCATAAGTTGCATTACTTGCAAGCAGTGATGAAAGAAACTCTTCGGTTGCATCCTACACTTCCACTTCTAGTCCCACATAGCCCCAGTGAAACCAGCAACGTCGGAGGCTACACCATCCCAAAGGGTTCTCGAATCTTCATCAATGTGTGGGCCATTCATAGAGACCCTTCCGTTTGGGAGAAACCTCTGGAATTTGATCCTACAAGGTTCTTGGATGATAAGTGGGATTTCAGTGGCAATGACTTCAGTTATTTTCCCTTTGGATCTGGAAGAAGAATCTGTGCAGGAATAGCAATGGCTGAGAAGACTGTTCTGCATCTTCTTGCCACACTTGTGCACTTGTTTGACTGGACAATACCACAAGGAGACAAGTTAGAAACAGCAGAAAAATTTGGAATTGTTCTAAGAAAGAATGTTCCTCTAGTTGCTATTCCCACCCCACGCTTCTCCAACCCAAACTTTTATAAGTAG 1596 0.485 MFSSPSILKQYTTMPLSSILSQTHYFSDQPITTLILFFLFFLVASYLFLKPNPRNLPPGPPGLPFFGNLLSLHPDLHTYFAALAQIHGPIFKLRLGSKLAIVITKPTLAREVLKDNDIVFANRDVPVAGRIATYGGTDIVWTPYGAEWRMLRKVCVVKMLSNVTLDSVYDLRRNEVCKMVSYLYDRAGSAVNVGEQVFLAVMNVITSMMWGGEVEGVDREILGAEFRELVAEMTQLLGKPNVSDFFPGLARFDLQGVEKEMQALVPRFDEIFERMIGERVKVNEKEDGKKKERKDFLQFLLDLKDSEGHDSKTPFTMTHLKALLMDMVVGGTDTSSNTIEFAMAEMMQKPNVMKKVQEELEVVVGKDRMVEESDIHKLHYLQAVMKETLRLHPTLPLLVPHSPSETSNVGGYTIPKGSRIFINVWAIHRDPSVWEKPLEFDPTRFLDDKWDFSGNDFSYFPFGSGRRICAGIAMAEKTVLHLLATLVHLFDWTIPQGDKLETAEKFGIVLRKNVPLVAIPTPRFSNPNFYK 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01340 531 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01340 531 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01340 531 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01340 531 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01340 531 SUPERFAMILY Cytochrome P450 57 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01340 531 CDD CYP76-like 84 520 - -
Vian1g01340 531 PANTHER OS08G0547900 PROTEIN 33 531 - -
Vian1g01340 531 FunFam Cytochrome P450 - like protein 46 517 - -
Vian1g01340 531 Pfam Cytochrome P450 57 512 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01340 531 Gene3D Cytochrome P450 50 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01340 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Vian1g01340 531 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01340 531 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01340 531 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01340 531 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01340 531 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01340 531 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01340 531 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01340 531 PRINTS E-class P450 group I signature 108 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01340 531 PRINTS E-class P450 group I signature 84 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01340 Vian-Chr1 14554120 14556868 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01340 23 530 Cytochrome P450 AT4G12300 58.835 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01340 - - vra:106769527 939.873