Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01336 ATGAATGCTTTCATTTTCATTCTTCTCACTTTTGTGTTGAGCTTCCATATTCATTTTGCTACAAGCAGTTCAAAAACATATATTGTTCATGTGAAGGGGCCACAGGATAGGACACTCGCTGAATTAGATGATTTGGAGAACTGGTATCATTCATTTTTGCCACCTACGATTATGAGCTCTGAGGAACAACCACGAATAATTTATTCATATCGGCACGTGATGAGTGGCACTGTATTGGCCGCATTGGATGCAGCTGTGGAGGATGGCGTGGATGTAATATCAATATCCCTTGGCCTAAAAGTGTCTCCTCCCTTTTTTTATGATAGCATCGCAATAGGCACGTTTGCAGCAATGCAGAAGGGAATCTTTGTAAGTTGTTCAGCGGGGAACTCTGGCCCTTTCTCTGGCACCTTGGTGAATGGAGCCCCTTGGATCCTCTCAGTTGGAGCAAGCAATGTTGACAGAAGCATTGTAGCAACAGCAAAGCTAGGAAACGGGCTAGAATTTGACGGCGAATCTGTTTTCCAGCCTTCCAATTATACTCCACTGCTACCCTTAGCCTATGCTGGTAATAATGGCAAACCTGAAGCTGCACTTTGTGCTACGGGATCCCTGAACTATATTGACTTCAGCGGCAAGGTTGTTTTGTGTGAGAGAGGAGGGGATACGGGAAGAATTGCCAAAGGGAAGGAAGTAAAGAGAGTTGGCGGTGCAGCCATGATTATCATGAATGATGAAAGCCATGGCTTCAGTCTCTTAGCTGATGTACATGTTCTACCTGCAACACATGTAAGCTATGATGCTGGACTTAAGATTATAGACTACATAAATTCAACTGAAACACCTACAGCTACCATTTTATTCAAGGGAACTGTAATAGGAAACTCCCTATCTCCGGCCGTTTCATCCTTCTCCTCAAGAGGTCCCAACTTGCCCAGTCCTGGTATTTTGAAACCGGACATCATAGGACCAGGCGTCAACATCCTAGCTGCCTGGCCATTCCCCCTTGACAACAATACTGATTCAAAATCCACTTTCAACATCATGTCCGGCACATCAATGTCATGCCCACATCTTAGTGGCGTAGCCGCTTTGCTCAAAAGCTCTCATCCTGACTGGTCACCAGCTGCCATAAAATCTGCCATAATGACTTCTGCATACATAATCAATTCTGAACACAAACTCATTGTTGACGAAACACTTCAACCTGCCGATATCTTTGCCACAGGTTCTGGCCACGTGAATCCACCAAGAGCAAATGACCCCGGGCTAGTTTATGATATCACTCCAGATGATTATATACCTTATCTATGTGGTTTAGGCTACAGAGATACGGAGGTTGGTATCATTGCACATAAAACAATTATGTGCTCTGGGATTTCAAGCATTCCCGAAGGAGAGCTGAACTATCCCTCATTTTCTGTGGTGCTTGGTTCCCCACAAACATTCACAAGGACTGTAACAAATGTAGGTGAGGCGAACTCGTCTTATGTTGTCCAGGTTACAGCGCCAGAAGGGGTCAATGTGAAGGTCCAGCCAGATAAACTGAACTTTTCAGAAGCAAACCAGAAAGAGGTATATTCAGTGTCATTCAGTCGTATAGAGTCAGGCAATGAAACTGAGGATTATGCTCAAGGGTTTTTACAATGGGTCTCTGTGAAACACACTGTAAGGAGTCCGATCTTAGTCATCTTTGTGTAA 1701 0.4421 MNAFIFILLTFVLSFHIHFATSSSKTYIVHVKGPQDRTLAELDDLENWYHSFLPPTIMSSEEQPRIIYSYRHVMSGTVLAALDAAVEDGVDVISISLGLKVSPPFFYDSIAIGTFAAMQKGIFVSCSAGNSGPFSGTLVNGAPWILSVGASNVDRSIVATAKLGNGLEFDGESVFQPSNYTPLLPLAYAGNNGKPEAALCATGSLNYIDFSGKVVLCERGGDTGRIAKGKEVKRVGGAAMIIMNDESHGFSLLADVHVLPATHVSYDAGLKIIDYINSTETPTATILFKGTVIGNSLSPAVSSFSSRGPNLPSPGILKPDIIGPGVNILAAWPFPLDNNTDSKSTFNIMSGTSMSCPHLSGVAALLKSSHPDWSPAAIKSAIMTSAYIINSEHKLIVDETLQPADIFATGSGHVNPPRANDPGLVYDITPDDYIPYLCGLGYRDTEVGIIAHKTIMCSGISSIPEGELNYPSFSVVLGSPQTFTRTVTNVGEANSSYVVQVTAPEGVNVKVQPDKLNFSEANQKEVYSVSFSRIESGNETEDYAQGFLQWVSVKHTVRSPILVIFV 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01336 566 SUPERFAMILY PA domain 194 278 IPR046450 -
Vian1g01336 566 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 73 562 IPR045051 -
Vian1g01336 566 Gene3D Peptidase S8/S53 domain 74 433 IPR036852 GO:0004252|GO:0006508
Vian1g01336 566 Gene3D - 437 565 - -
Vian1g01336 566 Pfam Fibronectin type-III domain 467 563 IPR041469 -
Vian1g01336 566 SUPERFAMILY Subtilisin-like 73 424 IPR036852 GO:0004252|GO:0006508
Vian1g01336 566 FunFam subtilisin-like protease SBT1.5 154 293 - -
Vian1g01336 566 Gene3D - 154 294 - -
Vian1g01336 566 ProSiteProfiles Serine proteases, subtilase domain profile. 1 420 - -
Vian1g01336 566 Pfam Subtilase family 76 390 IPR000209 GO:0006508|GO:0008236
Vian1g01336 566 Pfam PA domain 191 272 IPR003137 -
Vian1g01336 566 CDD PA_subtilisin_like 160 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01336 Vian-Chr1 14484998 14487220 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01336 78 561 Subtilisin-like Serine Gene Family AT2G05920 46.356 4.79e-137 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01336 - - gmx:100812208 845.499