Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01335 ATGGTAGCTACGGATATAAACGATGCCGGTCAAGTTCACTATATTCCAACCAGAGAGACTAATGCGCAATTAGTATGTTTTGGAGAAGACTGCCCAGAAAGCAGTGTATTGGCCGCATTGGATGCAGCTGTGGAGGATGGCGTGGACGTAATATCAATATCCCTTGGTCTAAACGAGCCACCTCCCTTTTTCAATGATAGCACCGCAATAGGCACATTTGCAGCAATGCAGAAGGGAATCTTTGTAAGTTGTTCGGCAGGGAACTCTGGTCCCGTTCACGGCTCCTTGGTTAATGGCGCTCCTTGGATCCTCACAGTCGGAGCAAGCAATATTGACAGAAGCATTGTAGCAACAGCCAAGCTAGGAAATGGACAAGAATTTGATGGGGAATCTGTTTTCCAGCCTTCCGACTTTTCTCCAACACCGCTGTTCCTAACATATGCTGGAAAGAATGGCAAACAACAAGCTGCCTTATGTGCCAATGGATCCTTGAATGATGTTGATTTTAGAGGCAAGGTTGTTTTGTGTGAGAGAGGAGGGGGGATAGGAAGAATCGCCAAAGGAGAGGAAGTTAAAAGAGCAGGTGGTACAGCCATGATTCTGATGAATGATGAAAGAAATGGTTTCAGTCTCTCAGCTGATGTGCATGTTCTACCAGCAACACATGTAAGCTATGATGCTGGACTTAAGATTAAAGCCTATATAAATTCAACTGAAACACCTACAGCTACCATTTTATTCAAGGGAACTGTAATAGGAAACTCCCTATCTCCGGCCGTTTCATCCTTCTCTTCAAGAGGTCCCAACTTGCCCAGTCCTGGTATTTTGAAACCAGACATCATAGGACCAGGCGTCAACATCCTAGCTGCCTGGCCATTCCCCCTTAACAACAGTACTGATTCAAAATCCACTTTCAACATCATGTCCGGCACATCAATGTCATGCCCACATCTTAGTGGCGTAGCCGCTTTGCTCAAAAGCTCTCATCCTGACTGGTCACCAGCTGCCATAAAGTCTGCCATAATGACTTCTGCAGACATAATCAACCTTGAAAAGAAACTCATTGTTGATGAAACACTTCACACAGCAGATGTCTTTGCCGCAGGTTCTGGCCACGTGAGTCCCTCAAGAGCAAATGACCCTGGGTTAGTTTATGATATCACGCCTGATGATTATATACCTTATCTCTGTGGTTTAGGCTACAGCGATACAGAGGTTGGGATCATTGCACATAAAACAATTAAGTGCTCTGAGACTTCAAGCATTCTCGAAGGAGAGCTCAACTATCCCTCGTTTTCTGTGGTGCTTGGTTCCCCAAAAACATTCACAAGGACTGTAACAAATGTAGGTGAGGCCAACTCGTGTTATGTTGTCCATGTTACAGCGCCAGAAGGGGTCAATGTGAAGGTCCAGCCAAATATACTGAACTTTTCAGAAGCAAACCAGAAACAGAAATATTCAGTGTCATTCAGCCGTATAGATTCGGGTAATGAAACTGCGGAATATGCTCAAGGGTTTTTACAATGGGTCTCTGTGAAACACACTGAATCAATAACTAACGTGGAGAGCATGGTGTAA 1578 0.4468 MVATDINDAGQVHYIPTRETNAQLVCFGEDCPESSVLAALDAAVEDGVDVISISLGLNEPPPFFNDSTAIGTFAAMQKGIFVSCSAGNSGPVHGSLVNGAPWILTVGASNIDRSIVATAKLGNGQEFDGESVFQPSDFSPTPLFLTYAGKNGKQQAALCANGSLNDVDFRGKVVLCERGGGIGRIAKGEEVKRAGGTAMILMNDERNGFSLSADVHVLPATHVSYDAGLKIKAYINSTETPTATILFKGTVIGNSLSPAVSSFSSRGPNLPSPGILKPDIIGPGVNILAAWPFPLNNSTDSKSTFNIMSGTSMSCPHLSGVAALLKSSHPDWSPAAIKSAIMTSADIINLEKKLIVDETLHTADVFAAGSGHVSPSRANDPGLVYDITPDDYIPYLCGLGYSDTEVGIIAHKTIKCSETSSILEGELNYPSFSVVLGSPKTFTRTVTNVGEANSCYVVHVTAPEGVNVKVQPNILNFSEANQKQKYSVSFSRIDSGNETAEYAQGFLQWVSVKHTESITNVESMV 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01335 525 Gene3D - 396 523 - -
Vian1g01335 525 Pfam Fibronectin type-III domain 426 515 IPR041469 -
Vian1g01335 525 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 514 IPR045051 -
Vian1g01335 525 Pfam PA domain 157 231 IPR003137 -
Vian1g01335 525 FunFam subtilisin-like protease SBT1.5 112 252 - -
Vian1g01335 525 Gene3D Peptidase S8/S53 domain 25 392 IPR036852 GO:0004252|GO:0006508
Vian1g01335 525 SUPERFAMILY PA domain 161 238 IPR046450 -
Vian1g01335 525 Gene3D - 112 253 - -
Vian1g01335 525 SUPERFAMILY Subtilisin-like 26 383 IPR036852 GO:0004252|GO:0006508
Vian1g01335 525 CDD PA_subtilisin_like 118 245 - -
Vian1g01335 525 Pfam Subtilase family 22 349 IPR000209 GO:0006508|GO:0008236
Vian1g01335 525 ProSiteProfiles Serine proteases, subtilase domain profile. 1 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01335 Vian-Chr1 14478369 14482871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01335 25 511 Subtilisin-like Serine Gene Family AT1G04110 47.410 6.91e-147 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01335 - - gmx:100812208 882.863