Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01322 ATGCACACTACCAAGCATCCCCCAAAACGTCCCCTTTTGCTCAAGGACTACCTCAGGGACGACCTCGGTTCCTGTTCATCCAACGGTTTTAAATCGTTGCCGCGCCGACGATGCTGCACCACCGTGGGATTCTTCGTTGAGAAAGATCTCCAACTCCAACGCAAAACAAGGAACACACTACCTCGACGTCGACGATCATCCGTGTCGGCTCTGCAGAGAGCTTCCGTGGCCGTAATCAACGCGATAAAATCGCTTCCGACGTCACAAAAGGGTGGTAGAGCGAAGAGAGGTGGCGTTCTCTGTAGAAGCCTCTCGAGGAAGCTGTTGAGTAGAAGCTTCTGGAAAAAAGCAGCAGTGGTGAGGGAAGAGGGAAGCCAACAAGGCGTGCCGCGGAGGAGGACATCTTTCCGGGAACTCATTATGCTGGATCAGGAACATCATAAAGCGACGTCGTTCATTGAGTATACTGCATTAGCTGCCCCGAGTTTCACCACTTCTTCTGGTTGTGGCAGTAACAGTTGGGGAGAGAGTGAATTCACGTTTGCATCTACCGCTGCTTCCTCTGAGAGCTCCAACGAAAACTACCTCCTGCTTGAGACAACCAAAGAGTATACACCACGACGTCACAAGGTAGAAGAAGAAGTGGTAACCAAGGAATACTGGGCAAATGAGAAAGAACAGTTTAGTCCTGTATCGATACTAGATTGTCCATTTGTAGATGAAGAAGAGATTTACAAGTGTCGTTTCAGATCCACTTCCTCTGTTGTTTCCATCACGGAAGGAAGGAAACACAAGCATATGCACGAAAGATGCCATTTAGAAAGTGTGGCTTCACCGGAGCCGGTGATTTTAGAGAAAAGGTTTGCGCGGTTAGAGGCGGGGGATGAAACACTCAAGCATTCTACAAAACAACGTTCCCGCGTAGTAGTGCCAGCAGCGCGTACTCGAAATAACTTGCGTCCTGCAAACAATCACGACATTGAGGAGAACGCTCGAAATCTTCTCAACTTCGTTAAAGGATCAAATCCACAGAACACTTTGATACTTAAGGCAGAGAACCTGCTGTTTGATTACTTCAAGAAGAGTGTTGGAGAATGTAAAGAAATTGATCTGTCAAAAAAGCTTCACCTTTGCAAGGTAGCAGAGGATTGGATAAACGGGCGACCCCAAGAACTGTATTTGGATTGGGAAGAACAAGGACGAAGGTCTGTGTATGTTAGGGAGATGGACAGATGTGAAGGGTGGAAAAACTATGATCAAGAAATACAACAATTGGGTGGGGACCTGGCAAACGAAGTCTTGACAATTCTGGTTAATGAGTCAGTGCTTGATCTTATGATACGTGCCAGCCACTGA 1356 0.4727 MHTTKHPPKRPLLLKDYLRDDLGSCSSNGFKSLPRRRCCTTVGFFVEKDLQLQRKTRNTLPRRRRSSVSALQRASVAVINAIKSLPTSQKGGRAKRGGVLCRSLSRKLLSRSFWKKAAVVREEGSQQGVPRRRTSFRELIMLDQEHHKATSFIEYTALAAPSFTTSSGCGSNSWGESEFTFASTAASSESSNENYLLLETTKEYTPRRHKVEEEVVTKEYWANEKEQFSPVSILDCPFVDEEEIYKCRFRSTSSVVSITEGRKHKHMHERCHLESVASPEPVILEKRFARLEAGDETLKHSTKQRSRVVVPAARTRNNLRPANNHDIEENARNLLNFVKGSNPQNTLILKAENLLFDYFKKSVGECKEIDLSKKLHLCKVAEDWINGRPQELYLDWEEQGRRSVYVREMDRCEGWKNYDQEIQQLGGDLANEVLTILVNESVLDLMIRASH 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01322 451 PANTHER OS04G0572500 PROTEIN 5 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01322 Vian-Chr1 14336950 14340190 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01322 10 447 TRM (TON1 Recruiting Motif) Superfamily AT4G23020 27.423 4.34e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01322 - - var:108329219 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01322 1 14336950 14340190 Vian1g01322 1 14336950 14340190 ECH