Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01311 ATGGGCAAGGCGTCAAAGTGGTTTCGCGGGCTTCTCGGTCTCAAAAAAACAGACCATCATAGCTCCCCACCCGCCAAGCCACCCAAAGAGAAACGCCGATGGAGCTTCGTTAAATCAAACACAGAAAAGGACAACAACGCTGCTGCCACGTGTCCACCACAACGAAACGACGGCGGCAAGCACGCCATGGCAGTCGCAGCAGCCACTGCTGCGGTGGCGGAAGCGGCCGTGGCTGCCGCCGAAGCTGCCGCCGTTGTTGTCAGACTAACGAGCAACAGTGGCAGATGTGCCGACGTGGGACCCACAAGGATTCGCCAACACTGGGCCGCCGTTAAGATCCAAGCCGCTTTTCGAGGCTGTTTGGCAAGGAGAGCACTGAGAGCATTAAAAGGGTTGGTGAAACTTCAAGCATTAGTGAGAGGTCACATTGAGAGGAAGCGTACAGCGCAGTGGCTGAAAAGAGTGCAAGCACTCTTGCATACACAGACACAAGTCTCTGCAGGGTTGGCTCTCCATGCCTCACCTTCAAGTGCAAAGTTATCTAGCCACTTCCATGGTCCGGAAACACCAGAAAAATTTGAAAGCCCCATCAGCTCTAAGAGCATGAAATATGAGCAATCACCTGTATTCAAGCGAAATGGCTCCAAATCCTGTGTCCAGATCAATGGCTATCAAGAGATATGTGGTAATAGATTGGAGAATCAAGTAACTGAACAACCATGGAGCTCGGCAAGATCATTGATAAGAACATATAGTTCCAATGATGAAAGAAATGACAGGGTTCTTGAAGTTGATTCTGGAAAACCACACTTTACAAAGCGTAGAAACCTCTCTTACTCCACAGTTTCTGATCATTATAGCAAGAGTTTGAACAGCACAAAGGAGTCAACATCTCTTCAATCTGGTCAAAGTCCATGTGGTGAAGTTCAGTCCTACAGTTACAGCTCACAAAAAGTCAACGAGATTGAGGATAGTCCATTCTGCACTGCTGACAACAGTCCACAATTCTTATCAGCCACTTCCAAAGATGATGGCTTCAAAAGAAGCCCTTTTACTCCCACAAGGAGTGATGGCTCTAGAAGCTACATTCGTGGTTATGCTGACTACCCAAGTTACATGGCATGCACTGCGTCTTCAAAAGCAAAGGTCAGATCTTTGAGTGCCCCAAAACAAAGGCCAAATTGTGAGAGGCCTGGTTCATCAAATAGATACTCTCTTAATGGATTTGACATGTCAAGATTGGCCACACAAAGGGCAATGCAAGCAAGCTTCACCAACAAGGCATATCCAGGTTCTGGTCGTTTGGACAAACTTGGTATGCCTGTGGGGTACAGATACTAA 1341 0.4773 MGKASKWFRGLLGLKKTDHHSSPPAKPPKEKRRWSFVKSNTEKDNNAAATCPPQRNDGGKHAMAVAAATAAVAEAAVAAAEAAAVVVRLTSNSGRCADVGPTRIRQHWAAVKIQAAFRGCLARRALRALKGLVKLQALVRGHIERKRTAQWLKRVQALLHTQTQVSAGLALHASPSSAKLSSHFHGPETPEKFESPISSKSMKYEQSPVFKRNGSKSCVQINGYQEICGNRLENQVTEQPWSSARSLIRTYSSNDERNDRVLEVDSGKPHFTKRRNLSYSTVSDHYSKSLNSTKESTSLQSGQSPCGEVQSYSYSSQKVNEIEDSPFCTADNSPQFLSATSKDDGFKRSPFTPTRSDGSRSYIRGYADYPSYMACTASSKAKVRSLSAPKQRPNCERPGSSNRYSLNGFDMSRLATQRAMQASFTNKAYPGSGRLDKLGMPVGYRY 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01311 446 MobiDBLite consensus disorder prediction 178 198 - -
Vian1g01311 446 Pfam Protein of unknown function (DUF4005) 333 411 IPR025064 -
Vian1g01311 446 MobiDBLite consensus disorder prediction 12 34 - -
Vian1g01311 446 ProSiteProfiles IQ motif profile. 130 157 IPR000048 GO:0005515
Vian1g01311 446 MobiDBLite consensus disorder prediction 1 34 - -
Vian1g01311 446 PANTHER IQ-DOMAIN 5-RELATED 1 407 - -
Vian1g01311 446 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 154 IPR027417 -
Vian1g01311 446 Gene3D - 104 158 - -
Vian1g01311 446 Pfam IQ calmodulin-binding motif 107 127 IPR000048 GO:0005515
Vian1g01311 446 Pfam IQ calmodulin-binding motif 133 147 IPR000048 GO:0005515
Vian1g01311 446 SMART iq_5 105 127 IPR000048 GO:0005515
Vian1g01311 446 SMART iq_5 128 149 IPR000048 GO:0005515
Vian1g01311 446 ProSiteProfiles IQ motif profile. 106 134 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01311 Vian-Chr1 14144571 14147437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01311 1 446 IQD Protein Family AT4G23060 41.667 4.26e-72 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01311 - - gmx:100793587 712.22