Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01301 ATGGCACGATCCATTTCTCATGTCTTATTTTCACTTGTTCTTTGCATTCTTCTGCAAGATCATATCCAAGCACTCAGACAGGGAGCTAGCCTTTCAAGGTCTGGCTTACCATCTAACAAGAAGTACCCATTGATCACCTCTGCTGAAGCACTAACTAAATCGGCATCAGATTCTGTTAACGCCTTTTTTTGCACGAATGACACTCTTGATGCTAGGAAGGTGAAGGGAAAGATATTGGTGTGTCTTCGCGGCGTAAATAGTAGAGTAGAGAAGGGTGTTGTAGCTGCTAGTTTAGGAGCTGTTGGAATGATTCTGGCTAATAATGCGGGCCAAGTTTCTGTTGATCCTGCGGAACTAAAGTTCAAGGAAAAGGGTGAGAAAAAAGAGTTTCGAGTTTCATTGACCTTGAAGTCCAAAACTGAGAACACCACTGATTTCGTATATGGGTCGTTGACATGGACTAATCACAAGAACCGCGTTAGGAGTCCAATTGTAGTTGTCTTGAATAGTTTCTGA 516 0.4244 MARSISHVLFSLVLCILLQDHIQALRQGASLSRSGLPSNKKYPLITSAEALTKSASDSVNAFFCTNDTLDARKVKGKILVCLRGVNSRVEKGVVAASLGAVGMILANNAGQVSVDPAELKFKEKGEKKEFRVSLTLKSKTENTTDFVYGSLTWTNHKNRVRSPIVVVLNSF 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01301 171 CDD PA_subtilisin_like 28 109 - -
Vian1g01301 171 Gene3D - 20 120 - -
Vian1g01301 171 Pfam Fibronectin type-III domain 108 166 IPR041469 -
Vian1g01301 171 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 40 108 IPR045051 -
Vian1g01301 171 SUPERFAMILY PA domain 71 116 IPR046450 -
Vian1g01301 171 Pfam PA domain 54 113 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01301 Vian-Chr1 14049155 14052780 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01301 112 168 Subtilisin-like Serine Gene Family AT2G04160 49.123 1.00e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01301 - - vun:114175516 124.02