Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01300 ATGAAGATGAGGGCAGAAGGGTTCCTTAACATGAATATGGTAGCGGTGGTGGCGTGGTTGTTGAACTTCAACATCGTTTTTTGTTTTGCTCATATTCATGGCTTCGGGGACCAACCACTCTCCAAGATTGCCATTCATAAAGCTGTTGTGTCTCTCCATTCTGCCGCTTCCATCACTGCCACACCGTCGCTTCTCGGTACGAAGGGTGAGGATACCCAATGGGTGACAGTAGATATTGATTACCCAGAACCATCTGCAGATGATTGGGTTGGAGTTTTCTCTCCTGCAAAGCTCAATTCATCAACATGTCCACCTGTGAGTGATCCAAAAGAAGAGATTCCGTACATATGCTCAGCCCCAATTAAGTTCAAGTTTCTGAATTACTCCAACTCACACTATACAAAGACAGGAAAAGGTTCTTTGAAGTTCCAGTTGATCAATCAACGTGCAGATTTCTCCTTTGCTCTATTTTCAGGAGGATTATTAAATCCTAAGCTTGTGGCAGTTTCCAATTTCATATCATTTGTCAATCCTAAGGTGCCTCTATATCCACGACTTGCTCAGGGGAAGTCTTGGGATGAAATGACAGTTACCTGGACTAGTGGATATCACATAAATGAAGCTATACCGTTTGTTGAGTGGGGTTCTGAGGGTAAAACACAAGTGCAATCTCCTGCCGGAACATTGACATTTGGTCGTAACAGCATGTGTGGTTCACCTGCACGAACTGTTGGCTGGCGTGACCCTGGTTTCATACATACAAGTTTTCTAAAAAACCTTTGGCCAAACTTAGTGTATACCTATCGATTAGGGCATCTACTGTCTAACGGTTCTTATATTTGGAGCAAGAAATATTCATTTAAGTCATCACCTTATCCTGGACAGGACTCACTGCAACGTGTTATCATATTTGGTGACATGGGAAAGGCCGAGCGTGATGGTTCAAATGAGTATAATGCCTATCAACCTGGTTCGCTTAACACCACTGACCAGCTCATCAAGGATTTAGAAAATATTGACATTGTTTTCCACATAGGAGATATAACTTATGCAAACGGATACATCTCGCAGTGGGACCAATTCACTGCTCAAGTGGAGCCAATTGCATCAACAGTACCTTACATGATTGCCAGTGGTAATCACGAACGTGATTGGCCCAACACAGGATCCTTTTATGACACTACAGATTCAGGTGGCGAATGTGGAGTTTTGGCCCAGAACATGTTTTTTGTTCCAGCAGACAACAGAGCAAACTTTTGGTACGCGACGGATTATGGCATGTTTCACTTTTGCATAGCTGACAGTGAACATGATTGGAGAGAAGGAACAGAACAATACAAATTCATTGAGCATTGCCTTGCAACAGTAGACAGACAAAAACAACCCTGGTTGATTTTTGTGGCTCATCGTGTGCTTGGATATTCTTCTAATACTTGGTATGCCATGGAGGGCTCATTTGAAGAACCCATGGGAAGGGAAAGTTTGCAGAAACTCTGGCAGAAATATAAAGTAGATATTGCATTTTATGGTCATGTCCATAACTACGAAAGGACATGCCCCATATATCAGAATCAATGTGTGAATGATGAAAGGACTCAGTATTCTGGTGTTGTGAATGGAACGATTCATGTTGTTGCTGGAGGTGCAGGAAGCCACTTGTCAGATTTCAGTGAAGTAACCCCAAAGTGGAGTCTTTACAGAGACTATGACTTTGGGTTTGTAAAGTTGACAGCATTCAATCATTCATCTCTCCTCTTTGAATACAAGAAAAGCAGTGATGGAAAGGTCTACGATTCTTTCACAGTTTCAAGGGATTACAAAGATGTCTTAGCCTGTGTGCATGATGGCTGCGAAGCAACCACTTCAGTAACTTGA 1875 0.4245 MKMRAEGFLNMNMVAVVAWLLNFNIVFCFAHIHGFGDQPLSKIAIHKAVVSLHSAASITATPSLLGTKGEDTQWVTVDIDYPEPSADDWVGVFSPAKLNSSTCPPVSDPKEEIPYICSAPIKFKFLNYSNSHYTKTGKGSLKFQLINQRADFSFALFSGGLLNPKLVAVSNFISFVNPKVPLYPRLAQGKSWDEMTVTWTSGYHINEAIPFVEWGSEGKTQVQSPAGTLTFGRNSMCGSPARTVGWRDPGFIHTSFLKNLWPNLVYTYRLGHLLSNGSYIWSKKYSFKSSPYPGQDSLQRVIIFGDMGKAERDGSNEYNAYQPGSLNTTDQLIKDLENIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMIASGNHERDWPNTGSFYDTTDSGGECGVLAQNMFFVPADNRANFWYATDYGMFHFCIADSEHDWREGTEQYKFIEHCLATVDRQKQPWLIFVAHRVLGYSSNTWYAMEGSFEEPMGRESLQKLWQKYKVDIAFYGHVHNYERTCPIYQNQCVNDERTQYSGVVNGTIHVVAGGAGSHLSDFSEVTPKWSLYRDYDFGFVKLTAFNHSSLLFEYKKSSDGKVYDSFTVSRDYKDVLACVHDGCEATTSVT 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01300 624 Pfam Fn3-like domain from Purple Acid Phosphatase 58 177 IPR040974 -
Vian1g01300 624 CDD MPP_PAPs 299 604 IPR041792 -
Vian1g01300 624 Gene3D - 181 292 - -
Vian1g01300 624 Gene3D - 294 608 IPR029052 -
Vian1g01300 624 Pfam Purple acid Phosphatase, N-terminal domain 186 288 IPR015914 GO:0003993|GO:0046872
Vian1g01300 624 Pfam Iron/zinc purple acid phosphatase-like protein C 540 599 IPR025733 -
Vian1g01300 624 SUPERFAMILY Metallo-dependent phosphatases 299 606 IPR029052 -
Vian1g01300 624 PANTHER PURPLE ACID PHOSPHATASE-RELATED 27 608 - -
Vian1g01300 624 Pfam Calcineurin-like phosphoesterase 300 515 IPR004843 GO:0016787
Vian1g01300 624 SUPERFAMILY Purple acid phosphatase, N-terminal domain 158 291 IPR008963 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01300 Vian-Chr1 14038457 14043738 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01300 49 599 Miscellaneous Gene Families AT1G13900 31.579 2.89e-68 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01300 K22390 - gmx:100814531 1171.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01300 1 14038457 14043738 Vian1g04241 1 65270249 65280774 ECH
Vian1g01300 1 14038457 14043738 Vian1g01300 1 14038457 14043738 ECH