Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01299 ATGGCCACCACCACCAGTCTTGGCGGCGGCGCTGGCGGAGATGACCGCGTCCTAGCCACGGCTCAGCAGATCGTGAAGAGCCTCAGAGCCGCCAAAGAGGATCGCGAAGACATGCTTCTGATCTTCTCCACCTTCGATAACCGACTATCCGGCATCTCCGACCTGATAAACGGCGACGATTCCAAATCCTCCGAAGAGGAAGAACTCGACCGCTTCGAAGCCGCGGAGAAAGTGATTCTCGCCGACGCTTCCCTCTCCGACGAGCCTTCGCGCCAATCCACTTCTCTCTTCAACCCTCCTAACAATCCCGTGGAGTACTTTTCCGCGGTTGATGAGATCATCCACTGGATGGAGCAGTTTTCGATCGCGCCACCCTCCTCCGCCGTGGGACGCACAGGGCCCGCCATCGTGGACCGGGCGGAGAACGCGATTCAACTCGCGATGTCGCGACTGGAGGACGAGATGCGGCACGTGCTGATTTGCAACACGATCCCGCTCGACGCCGTGAGCCGCTACGGTTCGATCAGGAGGGTTTCGCTCTCGTTCGGCTCGCACGACGGCGCCATCGACGATACCCTAGAGAGCTTCGGTGAGGTCGGCTCGAGTCGTTTCCACGAGCGAGGCGCGAGCCTCGGCGACGATTTGTTCGTCGATTTGGTGCGTCCCGAAGCGGTTCAGGATCTCAGGCAAATTATCGATCGCATGGTTAGGTCTGGTTATGAGAGAGAGTGTCTTCAGGTTTATAGCAGTGTCCGTCGCGACGCTCTGGATGAGTGTTTAGTCATTCTGGGTGTTGAGCGGTTGAGTATTGAAGAGGTTCAGAGGGTTGAGTGGAGAAGTTTGGATGAGAAGATGAAGAATTGGGTTCAGGCTGTGAAGGTTGTTGTTGGGGTTTTGTTGAGTGGTGAGAAGAGGCTGTGTGATGGTTTGTTTGGGGATTTGGATGACTTGAAGGAGATTTGTTTCAATGAGACTGCTAAGGGGTGTATTATGCAGTTACTGAATTTCGGCGAGGCTATTTCGATTTGTAAGCGCTCGCCAGAGAAGCTGTTTCGGATTTTGGACATGTATGAGGCTCTGAGGGATGCCATGCCTGATTTGCAGGCTATGGTTTCGGATGAGTTTGTGATTGGTGAGGCCAATGGAGTGCTGAGTGGACTTGGTGAGGCTGCCAAAGGGACTTTTGCTGAGTTTGAGAATTGTATTAGGACTGAAACTTCCAAAAAACCAGTCATAACTGGGGATGTTCACCCTTTGCCTCGTTATGTCATGAATTACCTCAAGTTGCTTGTGGATTATGGTGACCCTATGGATTCGCTTCTGGAGATTAGCGAGGAGGATCTCCATCGGTTTAAAAATGATCTTGGTGGTGATGGTTCGCAGTTGGAGGCCATGTCACCCTTGGGGCAGCGGATTCTGTTGCTCATGTCTGAGCTTGAGTATAATCTTGAGGAGAAGTCGAGGCTGTATGAAGATAGTGCTATGCAGCAGGTGTTTTTGATGAACAATCTGTATTACCTAGTGCGGAAAGTGAAGGACTCGGATCTTGGGAAGGTCTTGGGGGATAATTGGATTCGGAAACGACGTGGTCAGATACGGCAGTATGCTACAGGGTATCTCAGAGCCTCTTGGAGCAGGGCCTTGTCTTGTTTGAAGGATGAAGGGATTGGAGGGAGCTCTAATAATGCGTCGAAGATGGCTTTGAAGGAGAGATTCAAAAGCTTCAATGCCTGCTTTGAAGAAATTTATAGGGTTCAGACTGCTTGGAAGGTACCGGACGATCAACTTCGAGAGGAGCTGCGGATATCTATATCGGAGAAGGTGATTCCTGCATATCGCTCTTTTGTGGGTAGATTTAGGAGTCAGCTAGAGGGAAGGCATGCGGGGAAATACATCAAGTATACACCAGAGGATCTAGAGACCTATCTATTAGATCTATTTGAAGGATCCCCTGCTGTATTGCATCACATAAGGAGGAAAAGTACATAG 1989 0.5103 MATTTSLGGGAGGDDRVLATAQQIVKSLRAAKEDREDMLLIFSTFDNRLSGISDLINGDDSKSSEEEELDRFEAAEKVILADASLSDEPSRQSTSLFNPPNNPVEYFSAVDEIIHWMEQFSIAPPSSAVGRTGPAIVDRAENAIQLAMSRLEDEMRHVLICNTIPLDAVSRYGSIRRVSLSFGSHDGAIDDTLESFGEVGSSRFHERGASLGDDLFVDLVRPEAVQDLRQIIDRMVRSGYERECLQVYSSVRRDALDECLVILGVERLSIEEVQRVEWRSLDEKMKNWVQAVKVVVGVLLSGEKRLCDGLFGDLDDLKEICFNETAKGCIMQLLNFGEAISICKRSPEKLFRILDMYEALRDAMPDLQAMVSDEFVIGEANGVLSGLGEAAKGTFAEFENCIRTETSKKPVITGDVHPLPRYVMNYLKLLVDYGDPMDSLLEISEEDLHRFKNDLGGDGSQLEAMSPLGQRILLLMSELEYNLEEKSRLYEDSAMQQVFLMNNLYYLVRKVKDSDLGKVLGDNWIRKRRGQIRQYATGYLRASWSRALSCLKDEGIGGSSNNASKMALKERFKSFNACFEEIYRVQTAWKVPDDQLREELRISISEKVIPAYRSFVGRFRSQLEGRHAGKYIKYTPEDLETYLLDLFEGSPAVLHHIRRKST 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01299 662 PANTHER EXOCYST COMPLEX PROTEIN EXO70 66 649 IPR004140 GO:0000145|GO:0006887
Vian1g01299 662 SUPERFAMILY Cullin repeat-like 91 648 IPR016159 -
Vian1g01299 662 Pfam Exo70 exocyst complex subunit 286 644 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vian1g01299 662 Coils Coil 137 157 - -
Vian1g01299 662 Gene3D Exocyst complex component Exo70 90 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01299 Vian-Chr1 14020939 14022927 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01299 15 661 EXO70 exocyst subunit family AT5G50380 59.735 0.0 776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01299 K07195 - gmx:100818693 1194.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01299 1 14020939 14022927 Vian1g01299 1 14020939 14022927 ECH