Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01265 ATGGCTCCCAAAACCGTATCCATTGACTACCAAACCACCCGGGTCTTACCCGAACCCGATGTCTTCATACACTGTTCCCAAGGAACACGCATTCCAGCTCACGCTGCCGTTCTGGCTTCGGTGTCGCCGGTTTTCGAGAACTTCATAGATCGGCCACGTAAGCATCGGAGTTCCGAGAAAATTATCCAAATCCACGGCGTCCCTTGCGACGCCGTCATCGCCTTCGTCGGATTCCTCTACTCCTCCAGGTGCACTGAGGAGGTGATGGACAAGTACGGGATGCACCTGCTCGCATTGTCGCACGTGTACCTGGTGCCGCAGCTGAAACAGAGATGCATCAAGGGTTTGGCCCAGCGCTTGACCACAGAGAACGTGGTGGACGTGCTGCAACTCGCGCGCCTCTGCGACGCACCGGATCTCCACCTCCGATGCATGAAGCTCCTCACCTATAACTTCAAAGCGGTGGAAGCAACCGAGGGGTGGAAGTTCCTCGTCAAACACGATCCCTGGCTCGAACTCGACATTCTCCGCTTCATCGACGAACACGAAACGAGGAAGAAGAAATCGAGAAGGTATAGGATGGAGCAGGGTCTGTACGGAGAACTGAGCGAGGCGATGGAGTGTCTGGAACACATATGCTCGGAGGGGTGCACCCATGTTGGTCCCTACGATTCGGAGGTGAAGAGAGAGAGGAGGCCCTGTGGCAGATTCTCCACGTGTGAAGGGCTTCAGGTTCTGATCCGCCACTTTGCCACGTGCGAGAAAAGAATGGGCGGTGGTTGCGTCCGCTGCAAACGGATGTGGCAACTATTTCGACTTCATTCATACGTTTGCCACCAAACTGATTCTTCCTGCAAGGTTCCTTTCTGCAGGCAATTTCAGTTGAAGATGCAGCAAGAGAAGAGAAAGGATGATGCTAAGTGGAAACTTCTAGCTCGGAAGGTGGCCTCAGCCAAAGTGATGTATTCTCTGTCTCTTCCAAAGAGGAAACGAGATGAGGAGATGAGAGGCACAATAAACAATCACGGGATTAGAAGCTTTAAATTACTATGA 1053 0.528 MAPKTVSIDYQTTRVLPEPDVFIHCSQGTRIPAHAAVLASVSPVFENFIDRPRKHRSSEKIIQIHGVPCDAVIAFVGFLYSSRCTEEVMDKYGMHLLALSHVYLVPQLKQRCIKGLAQRLTTENVVDVLQLARLCDAPDLHLRCMKLLTYNFKAVEATEGWKFLVKHDPWLELDILRFIDEHETRKKKSRRYRMEQGLYGELSEAMECLEHICSEGCTHVGPYDSEVKRERRPCGRFSTCEGLQVLIRHFATCEKRMGGGCVRCKRMWQLFRLHSYVCHQTDSSCKVPFCRQFQLKMQQEKRKDDAKWKLLARKVASAKVMYSLSLPKRKRDEEMRGTINNHGIRSFKLL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01265 350 FunFam BTB/POZ and TAZ domain-containing protein 2 121 191 - -
Vian1g01265 350 SUPERFAMILY TAZ domain 195 299 IPR035898 -
Vian1g01265 350 ProSiteProfiles BTB domain profile. 19 83 IPR000210 GO:0005515
Vian1g01265 350 Gene3D - 121 194 - -
Vian1g01265 350 Pfam TAZ zinc finger 203 290 IPR000197 -
Vian1g01265 350 Gene3D Potassium Channel Kv1.1; Chain A 17 120 IPR011333 -
Vian1g01265 350 SMART TAZ_2 196 291 IPR000197 -
Vian1g01265 350 Gene3D TAZ domain 195 319 IPR035898 -
Vian1g01265 350 SMART BTB_4 19 120 IPR000210 GO:0005515
Vian1g01265 350 Pfam BTB/POZ domain 19 118 IPR000210 GO:0005515
Vian1g01265 350 FunFam BTB/POZ and TAZ domain-containing protein 2 192 319 - -
Vian1g01265 350 SUPERFAMILY POZ domain 20 118 IPR011333 -
Vian1g01265 350 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 17 333 IPR044513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01265 Vian-Chr1 13654701 13657802 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Vian1g01265 BTB 1.2e-13 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01265 - - gmx:100807120 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01265 1 13654701 13657802 Vian1g01265 1 13654701 13657802 ECH
Vian1g01265 1 13654701 13657802 Vian4g00927 4 13334360 13337819 PCT