Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01252 ATGGAAGAAGTGTTCGTTTCTACCTTCTATCTTTCTCTTTCCATTTTCATCAGTGTTCTGTTATTCTGTAAGCTCACAAGAAGATCCAAACCCAAAACCAATCTGAATCTGCCACCATCTCCTCCAAAGCTGCCATTCATAGGCAATCTTCATCAGTTTGGTACACTGCCACATCGAGCTCTTCGAAATCTCTCTCTAAAATATGGAGATATAATGATGTTGCAGTTGGGACAGATGCAAAATCCAACCCTCGTCGTTTCATCTGTAGATTTGGTCACCGAAATAATCAAAACACATGACCTAGCCTTTTCGGACCGACCCCAAAACACTTCCTCTAAAATCTTACTCTACGGATGCACAGATGTTGGCTTCTCACTCTATGGAGAAAACTGGAGACGGAAAAGAAAAATATGTGTGCTTGAACTTCTGAGCACCAAAAGGGTGGATTCCTTTCGACTCATCAGGGAAGAAGAAGCTGCGGAGTTGGTGAAAAAGCTACTTGAAGCAAGCTGGGATGATGCAAGTTACGTGAATCTGAGTGAGATGATTATGTCAACATCAAATAATATCGTGTGTAAATGTGCATTTGGAAGGAAGTTTGAAGGAGTTGGTTACGGCAGAGTGAAAGAGTTGGCAAGGGAAGCCTTGATCCATATGACAGCTTTCACTGTTAGAGATTACTTCCCTTGGTTGGGTTGGGTTGATGTTGTTACAGGAAAAATTCAGAAATACAAGGCCACAGCTGCAGCAATGGATGCTTTATTTGAAGAGGTGATTGCAGAACGTTTGAGGCAGAGAAGAGAAGGTGAACACTCCGAAATGAAAGATTTCTTGGATATTCTCCTCAAACATCACGAGGATAACATGCTGGGATACGAGTTTACCAAAAATGACATCAAATCACTTATTACGGACATGTTTCTGGGAGGTACCGACACAACTGCGATCATATTGGAGTGGGCTATGTCAGAACTTATGAGAAACCAAACAACAATGAAAAAAGTGCAAGAAGAAGTGAGGAGAATTGTAGGTCATAAATCAAAGGTGGAAGAGAATGATGTGAATGAAATGAAATATCTAAAATGTGTAGTCAAAGAAACTATAAGGTTACACCCTCCAGCTCCTCTTTTGGCTCCTCGAGTAACAATGTCTGATGTAAAACTAAATGGATACGATATTCCTGCAAAAACAACGGTATATATCAATGCATGGGCAATGCAAATGGATCCTAAACTTTGGGATCGTCCTGAAGAATTTCTGCCAGAGAGATTTGAAAACAGTGATTTTGATTTCAAAAACCAAGAAAACTTTCACTTTATTCCATTTGGTTTTGGAAGAAGAGGATGTCCTGGAATGAGTTTTGGAATCAGTTCAATTGAGTATGTGCTTGCTAATCTTCTTTGTTGGTTCGACTGGATGTTGCCTGAAACTGGTACTGCTACACTTGATATAGACATGACCGAGATATTTGGACTTGTTGTCTCGAAGAAACTACCACTTCTCCTTAAACCAAAAACCTATTCATCTTGA 1530 0.4007 MEEVFVSTFYLSLSIFISVLLFCKLTRRSKPKTNLNLPPSPPKLPFIGNLHQFGTLPHRALRNLSLKYGDIMMLQLGQMQNPTLVVSSVDLVTEIIKTHDLAFSDRPQNTSSKILLYGCTDVGFSLYGENWRRKRKICVLELLSTKRVDSFRLIREEEAAELVKKLLEASWDDASYVNLSEMIMSTSNNIVCKCAFGRKFEGVGYGRVKELAREALIHMTAFTVRDYFPWLGWVDVVTGKIQKYKATAAAMDALFEEVIAERLRQRREGEHSEMKDFLDILLKHHEDNMLGYEFTKNDIKSLITDMFLGGTDTTAIILEWAMSELMRNQTTMKKVQEEVRRIVGHKSKVEENDVNEMKYLKCVVKETIRLHPPAPLLAPRVTMSDVKLNGYDIPAKTTVYINAWAMQMDPKLWDRPEEFLPERFENSDFDFKNQENFHFIPFGFGRRGCPGMSFGISSIEYVLANLLCWFDWMLPETGTATLDIDMTEIFGLVVSKKLPLLLKPKTYSS 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01252 509 CDD CYP71-like 67 495 - -
Vian1g01252 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Vian1g01252 509 SUPERFAMILY Cytochrome P450 38 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01252 509 Gene3D Cytochrome P450 23 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01252 509 FunFam Cytochrome P450 83B1 24 503 - -
Vian1g01252 509 Pfam Cytochrome P450 38 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01252 509 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01252 509 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01252 509 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01252 509 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01252 509 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01252 509 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01252 509 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01252 509 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01252 509 PANTHER CYTOCHROME P450 71B11-RELATED 21 504 - -
Vian1g01252 509 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01252 509 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01252 509 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01252 Vian-Chr1 13521283 13524200 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01252 38 507 Cytochrome P450 AT3G26330 44.842 2.58e-138 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01252 K20617 - gmx:100803922 761.911