Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01251 ATGGCTCTTAAACAATGGCCTCATGAGCAAATGGAAAGAGTATTCTCTTCTACCTTCTATCTTTCTCTTTCCTTCTTCATCAGTGTTCTGTTATTCTTTAAGCTCGCAAGAAGATCCAAACCCAAAACCAATCTGAATCTGCCACCATCTCCACCAAAGCTCCCATTCATAGGCAATCTGCATCAGTTTGGGACACTGCCACATCGAGCTCTTCGAGATCTCTCTCTAAAATATGGAGACATAATGATGTTGCAGTTGGGACAGATGCAAACTCCAACCCTCGTCGTTTCATCTGTAGATTTGTTCGCCGAAATAATCAAAACACATGACCTAGCCTTTTCGGACCGACCCCAAAACACTGCTGCAAATATCTTACTCTATGGATGCACAGACTTTGCTTTTGCACTCTATGGAGAAAACTGGAGACAGAAAAGAAAAATATGTGTGCTTGAACTTCTGAGCACGAAAAAGGTGCAATCATTTGGAGCAATCAGGGAAGAAGAAGTTGCGCAGTTGGTGAAGAAGCTACGTGAAGCTAGCAAGAGTGATGAAAACGTTGTGAATCTAAGTGAGATGGTCATGTCAACATCAAATAATATTGCGTGCAAATGTGCTCTTGGGAGGAAGTTTGCAGGAGATGGTTACACGAGAGTGAAAGAGTTAGCAAGGGAAGTGATGATTCATCTCACAGCTTTCACAGTGAGAGATTACTTTCCTTGGTTGGGTTGGGTTGATGTTGTTACTGGAAAAATTCAGAAATACAAAGCCACTGCTGAAGCACTGGATAGTTTATTTGATGAGGTAATTGCAGAAGAGATGAGCGTCAAAAGGGAAGGTGAACACTCCAAAAACAAAGTCTTCTTGGACGTCCTCCTCCAACTTCATAAGGATAACACGCTCAGCGTCGACCTCGCCAAAAATGACATCAAAGCAATTTTAACGGACATGTTTGTGGGAGGCACTGACACAACTTCATCGGCGATAGAATGGACCATGTCTGAGCTTTTAAGAAATCCAGTGATAATGAAAAAAGTACAAGAAGAAGTGAGAGCAGTTGTAGGTGATAAATCAAATGTAGAAGAAAGTGACATTAAGAAAATGCACTACTTAAAGTGCGTGATAAAAGAATCTCTAAGAATACACCCTCCAACTCCTCTTTTGGCTCCTCGAGTAACGATTTCTGCTGTAAAACTGAAAGGATATGATATTCCGGCAAAAACAACGGTATATATCAACTCATGGGCAATGCAAAGGGATCCCAAATTCTGGGAAAGTCCTGAAGAGTTCATGCCAGAGAGATTTGAAAATATTGAAGTTGATTTTAAAGGTCAAGAAGACTTTCAGTTTATTCCGTTTGGTTTTGGGAGAAGAGGATGTCCTGGAATTAACTTTGCCAATGCTTCTATGGAGTATATGCTTGCTAATCTTCTTTATTGGTTTGATTGGAAGCTGCCAGAAACTGATTCACAAGACATAGATATGACCGAAATATTTGGACTTGTTGTCGCAAAGAAAGTACCACTTCACGTTAAACCAACGACCTTTTCATTCTAA 1554 0.406 MALKQWPHEQMERVFSSTFYLSLSFFISVLLFFKLARRSKPKTNLNLPPSPPKLPFIGNLHQFGTLPHRALRDLSLKYGDIMMLQLGQMQTPTLVVSSVDLFAEIIKTHDLAFSDRPQNTAANILLYGCTDFAFALYGENWRQKRKICVLELLSTKKVQSFGAIREEEVAQLVKKLREASKSDENVVNLSEMVMSTSNNIACKCALGRKFAGDGYTRVKELAREVMIHLTAFTVRDYFPWLGWVDVVTGKIQKYKATAEALDSLFDEVIAEEMSVKREGEHSKNKVFLDVLLQLHKDNTLSVDLAKNDIKAILTDMFVGGTDTTSSAIEWTMSELLRNPVIMKKVQEEVRAVVGDKSNVEESDIKKMHYLKCVIKESLRIHPPTPLLAPRVTISAVKLKGYDIPAKTTVYINSWAMQRDPKFWESPEEFMPERFENIEVDFKGQEDFQFIPFGFGRRGCPGINFANASMEYMLANLLYWFDWKLPETDSQDIDMTEIFGLVVAKKVPLHVKPTTFSF 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01251 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Vian1g01251 517 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01251 517 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01251 517 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01251 517 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01251 517 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01251 517 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01251 517 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01251 517 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01251 517 PANTHER CYTOCHROME P450 71B11-RELATED 31 513 - -
Vian1g01251 517 FunFam Cytochrome P450 83B1 34 511 - -
Vian1g01251 517 SUPERFAMILY Cytochrome P450 48 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01251 517 CDD CYP71-like 77 508 - -
Vian1g01251 517 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01251 517 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01251 517 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01251 517 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01251 517 Gene3D Cytochrome P450 37 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g01251 517 Pfam Cytochrome P450 48 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01251 Vian-Chr1 13513862 13516081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01251 37 509 Cytochrome P450 AT3G48270 44.000 6.13e-137 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01251 K20617 - gmx:100803922 816.609