Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01237 ATGACAAGGATTAGCGAGCTGTGCGGTTCGCCGGCGACACTCCGGTGTCCTTTGCCAAACGGGGACTTGGTCACCTTGATTTCCGTCAAAAACGACGAAGATTTGGCAAATATAATCGAGGAATACGATCGAGTTTCTTCGTCCTTACCTCATCGGTTGAAGATCAGAGCCATTCTTTCGCCGCTGGACAAATCATCTCCTTCTCCATCTTCTTCGTCCAGCGCCTCTCACACTCCGCCTGGTTCGCCTCACTCATCCGCCAGTTCCCTGCCGTGTTCTGAGGCTCACCGATTCGGCTGCCGGAACTGCTCGCCAACTGCGTATTCTATATGCCCCCTTAACGGAGCGGCAAAATCCGGTTCGTATCACTCCTCTCCCTGTTCCTTGCCGTGCTACGCGGTGCACCGGTTCCGTTGCCGGAATTGTTCCTCGGGTGCGTATCTTACCAGCATCCGTAATGGAGCGGCTAAATCCAGTTCTCCTCACCCCTCCGGCGGCTCCCCGCCGTATTCCACAGCCCACCGGTTCGGCTGCCAGAATTGCTCGCCGATTTCGTATCCAATTGGCGTCTGTAACGCGGCGGTAAAAGGATGTTAG 597 0.5544 MTRISELCGSPATLRCPLPNGDLVTLISVKNDEDLANIIEEYDRVSSSLPHRLKIRAILSPLDKSSPSPSSSSSASHTPPGSPHSSASSLPCSEAHRFGCRNCSPTAYSICPLNGAAKSGSYHSSPCSLPCYAVHRFRCRNCSSGAYLTSIRNGAAKSSSPHPSGGSPPYSTAHRFGCQNCSPISYPIGVCNAAVKGC 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01237 198 PANTHER OS05G0427100 PROTEIN-RELATED 1 156 - -
Vian1g01237 198 Pfam PB1 domain 1 53 IPR000270 GO:0005515
Vian1g01237 198 MobiDBLite consensus disorder prediction 63 88 - -
Vian1g01237 198 SUPERFAMILY CAD & PB1 domains 2 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01237 Vian-Chr1 13385261 13385857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01237 1 69 MAP Kinase Kinase Kinase AT1G04700 42.029 4.05e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01237 - - vun:114177582 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01237 1 13385261 13385857 Vian1g01237 1 13385261 13385857 ECH
Vian1g01237 1 13385261 13385857 Vian4g00895 4 12681067 12681757 PCT