Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01220 ATGGTAGGGGTGAAAGGAGCAAGCAAAGGGAACTTGCCAGTGTTGCTGCACTCCTATCCTGATAATACAACCAGGAGGAGTTCACTTTGGAAAGGTTCTTGTCAATATCACTGTATGCAAACTGAACCCGGGTTACACAACTTTGTTAATGATTCTTTAGGAGTGAGACAGGCTTTGGAGCCCTTGATTGTGTGGGCGGAGCAAGTGGTGCCGCGAGAAATGCGCGGCAGTACTCCTGCTTTTGTCTTGGCTACTGCTGGGTTGAGGGGGCTCACCTTGGAGGACGCTGATAGGGTATTGGGAGATATTGAGGCTGTTGTGAAAGGCCATAGCTTTATGATGAGCAAGAGCTGGATAAGGGTTTTGAGTGGGAAGGAGGAAGCTTATTATGGCTGGGTGGCTTTGAACTACAAAATAGGCACCTTTGATGATAACTATCCCAACTCTCCCACTTTGGGACTTGTTGATATTGGGGGCTCGTCGTTGCAGATTGTGGCAGAGATAGATGTTGCTGTTGATGATGTGCATGTGATGAAATCAAGGCTCGGATCAACGGAACATCGGATTATGGCATATTCATTGCCTGCGTTTGGCCTAAATGAAGCGTTTGATAGGACAGTTCTTAGGCTCAGAAACAATCAAAGTGAGGAAAGAACTGCCAGTATCTCTGACCTCAGACATCCTTGTCTGTTATCAACTTATGTACAAAACTATACATGCCATTCTTGCTCTGCATTGGCTTCCATTTATGAGAAAAAACACAGTCAAGACCGGGAAAGTGAGCTTTATTCTTTACGTCTTACTGGAGAACCTAATTGGGAGCAATGCAGAGAACTAGCTATTGGTGCCGCCATGAACTCGAGTTCCAAAGTGTCACATCTGACAGTTAGCAAAAATTGCCAAGCTAGTTTATTTTCTGGTACTGGCATTGATATACTTAATTTAACAGCTGTTGCACAACCAGCCAAGTTTCATGCATTGTCTGGTTTCTTTTTTGTCTACAATAAGCTAAATTTGAGCCCAAGAACCAACTTAACAATGGTTTGGGAATCAGGCAAACAAATATGTTCAAATTTATGGTCTGGTTTGAGCAGTGTTTCTGATAATCCAGATTATGCTGGACTATTTTGTTTCCAGGTGGCTTATATGGCATCATTGATTGATTATGGTCTCTGTCTTGGGGATGTTGAAATGATATTTGGCCCAGGTGACATTTCGTGGACTTTAGGAGCTGCATTAATTGAAGGGAAATTTTTGTGGTTAAACAGTACAAGCTACGAAGCCCATGCTATTATTTCAACTTTAAAGAATGTCAAGGTCACGTCTTCTCCTACTGTTCTATTTGCTGTACTCGTATTACTTTCATTGATTGTTTATTGTAGTCAAATTAGGCTACCAATGCCAAGTAGAAGGGATTCTGCTCCTGGCTCATCTTTGCCATCTTATACTCCTATAAGACGTCGATCTAACTAA 1473 0.4243 MVGVKGASKGNLPVLLHSYPDNTTRRSSLWKGSCQYHCMQTEPGLHNFVNDSLGVRQALEPLIVWAEQVVPREMRGSTPAFVLATAGLRGLTLEDADRVLGDIEAVVKGHSFMMSKSWIRVLSGKEEAYYGWVALNYKIGTFDDNYPNSPTLGLVDIGGSSLQIVAEIDVAVDDVHVMKSRLGSTEHRIMAYSLPAFGLNEAFDRTVLRLRNNQSEERTASISDLRHPCLLSTYVQNYTCHSCSALASIYEKKHSQDRESELYSLRLTGEPNWEQCRELAIGAAMNSSSKVSHLTVSKNCQASLFSGTGIDILNLTAVAQPAKFHALSGFFFVYNKLNLSPRTNLTMVWESGKQICSNLWSGLSSVSDNPDYAGLFCFQVAYMASLIDYGLCLGDVEMIFGPGDISWTLGAALIEGKFLWLNSTSYEAHAIISTLKNVKVTSSPTVLFAVLVLLSLIVYCSQIRLPMPSRRDSAPGSSLPSYTPIRRRSN 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01220 490 Gene3D - 13 123 - -
Vian1g01220 490 Gene3D Exopolyphosphatase. Domain 2 124 399 - -
Vian1g01220 490 MobiDBLite consensus disorder prediction 468 490 - -
Vian1g01220 490 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 30 416 IPR000407 GO:0016787
Vian1g01220 490 MobiDBLite consensus disorder prediction 474 490 - -
Vian1g01220 490 Pfam GDA1/CD39 (nucleoside phosphatase) family 33 415 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01220 Vian-Chr1 13118897 13120876 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01220 11 419 Nodulin-like Gene Family AT4G19180 35.461 1.96e-76 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01220 - - vun:114175521 910.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01220 1 13118897 13120876 Vian1g01220 1 13118897 13120876 ECH