Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01205 ATGCAGAGCATAGTTCTTTCTTTCTCCCCTTTGCTCTCTCTCCGCAAACTTCACACCTCTCTCTCTCCTTCCACTGCCAAACCCAACCGCATTCTCACTTTCTCTTCCTCTTCATTCCCATGTCAACGGTCTTCTCCTTCTTCTTTCAAACTTGCTCCCTCTCCTCCCTTGCTCCATGCCGGACCAACCTCCGTGCCGGAGGGCAGTGCCGTCGAGTTCTCTGGGGGCAACAGGCTGCTCAACATTCTTGAATTGGGTTCCCTGTTTGCGTTCTGGATCCTCTTCAACATCTACTTCAACATCTATAACAAACAGGTCTTAAAAGTTTACCATTTCCCTTTAACCGTTAGCACGATTCAGTTTGCCATGGGGACTCTCCTCGTAGCGTTCATGTGGGGTTTTAATCTCTACAAGAGGCCAAGACTCAGTGGCGCGCAGCTTGCAGCGATATGGCCACTGGCTCTGGTTCATACTTTAGGGAATCTTTTTACTAACATGAGTCTTGGGATGGTTGCTGTGTCTTTTACTCACACAATAAAAGCTATGGAGCCTTTTTTTTCAGTGCTCCTTTCTGCTATGTTTCTTGGAGAGGGATTAAATGTTAACGAAGTGTGTATCAGATCTCTTCTTGCTGCGCTATGTTACCATGCCTATCAGCAAGTTGCGTATATGATACTGCAGAAGGTGTCACCTGTTACCCACTCTGTAGGAAATTGTGTGAAAAGGGTTGTGGTCATCGTGAGCTCAGTCATCTTCTTCCGAACTCCAGTATCACCAATTAACGCACTTGGCACTGCTATAGCTCTTGCTGGCGTTTTCCTGTATTCCAGGGCGAGGCGACTAAAGTCAAAGACCATTTAG 861 0.4692 MQSIVLSFSPLLSLRKLHTSLSPSTAKPNRILTFSSSSFPCQRSSPSSFKLAPSPPLLHAGPTSVPEGSAVEFSGGNRLLNILELGSLFAFWILFNIYFNIYNKQVLKVYHFPLTVSTIQFAMGTLLVAFMWGFNLYKRPRLSGAQLAAIWPLALVHTLGNLFTNMSLGMVAVSFTHTIKAMEPFFSVLLSAMFLGEGLNVNEVCIRSLLAALCYHAYQQVAYMILQKVSPVTHSVGNCVKRVVVIVSSVIFFRTPVSPINALGTAIALAGVFLYSRARRLKSKTI 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01205 286 PANTHER SOLUTE CARRIER FAMILY 35 197 279 - -
Vian1g01205 286 Pfam Triose-phosphate Transporter family 200 276 IPR004853 -
Vian1g01205 286 Pfam Triose-phosphate Transporter family 84 199 IPR004853 -
Vian1g01205 286 SUPERFAMILY Multidrug resistance efflux transporter EmrE 128 202 - -
Vian1g01205 286 SUPERFAMILY Multidrug resistance efflux transporter EmrE 208 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01205 Vian-Chr1 12964977 12967495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01205 158 284 Antiporters AT5G33320 59.690 2.08e-32 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01205 K15283 - oeu:111384998 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01205 1 12964977 12967495 Vian1g01205 1 12964977 12967495 ECH