Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01195 ATGTTACCTTCTTCCTTCAACAATCTTACTCAACTGCAACATCTAGACATAAACAATTGCAACAAGCTTCAAACAATACCAGAGCTTCCTCCGTCCCTTCAAACTCTACAAGTCAGCAAATGCAAATCTCTTCGGAATCTGTCAAACCTTCCATCATCTCTTAAAACTTTAAAAGCCATTGAATGCAAATCATTGAAGACTGTATCGTTTCCTTCAACCGCTGATGAACAATTAACGGAAAACAAGAAACGGTTTTTGTTCTGGAATTGCAGGAACTTGGATGAAAGTTCTGCAGAGGCTATTGGGTGTTGCCTCATTCATTCCCATCTGGTGAACGACTCCACCGTCAATGACGACTTTCACACTTTGAAGGTCATGGTGACGAAGTTGCGAATGGATAAGGACCACAAAATCCTTGCTCAATCCAAGGTTAAGGGTCATGTCGTCACCAATAAGGAAAAGGGTACAAAGTTTGCTCCTAAGGATATCATGCACGACGAGAGGTGGTGCTGTGGTGTGTTTAACGTCCAACGTGAGTGGTTGGCGAAGGGCGACCTGCTTGGATAA 567 0.4303 MLPSSFNNLTQLQHLDINNCNKLQTIPELPPSLQTLQVSKCKSLRNLSNLPSSLKTLKAIECKSLKTVSFPSTADEQLTENKKRFLFWNCRNLDESSAEAIGCCLIHSHLVNDSTVNDDFHTLKVMVTKLRMDKDHKILAQSKVKGHVVTNKEKGTKFAPKDIMHDERWCCGVFNVQREWLAKGDLLG 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01195 188 Gene3D Ribonuclease Inhibitor 1 95 IPR032675 -
Vian1g01195 188 SUPERFAMILY L domain-like 2 93 - -
Vian1g01195 188 PANTHER OS11G0677101 PROTEIN 3 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01195 Vian-Chr1 12866714 12867787 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01195 106 166 Cytoplasmic Ribosomal Protein Gene Family AT3G49910 47.541 5.00e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01195 - - vra:111240744 195.667