Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01167 ATGGGAGTTGGAGGAAGATTGTTGCAATGGACTCCATTTGCAGCCATGATCATGGTAGAGTGCCTTGACGTGGGTCTCTCTACTTTAGGTAAAGCAGCCATGGAAAGAGGAATGAACCATTTCGTCTTTGTTGTCTACTCCAACGCCCTTGCTACTCTCATTCTCCTCCCTGTCTCTTTCCTCATCAACAGAACCACAAGAGCACCGCTTTCGTTCGCTCTTCTCTGCAAGTTCTTCCTCCTAGGCACTCTTGGCATAACTGTTATGCAGAATTGTGTTTTCACCGCCATTGACTACAGCTCTCCCACTCTTGGATCCGCCATGAACAATTTGACTCCAGCTATCACTTTTGTGCTAGCTGTCATCTTCGGGATGGAGAAGTTGAATATTGGAAGCTCAATAAGCCAGATCAAGGTCACAGGAACAGTGCTATCCATCTCTGGAGCATTACTGGTGACCCTTTACAAGGGCATTCCCATCACCAGCTCTCGAATTCAACTCTCTCCATCGCAACCTTTGTCATCTTTGTTGGCTCAAACAAGTAACTGGGCAATTGGGGGTGCCTTCTTTGCCACTGCTTCTGTCTCTCTTGCACTCTGGAATATTACACAGGCAGCAATTCTTAAAGGATATTCATCACAGTCAACCATATTAGCCTTCTATTGCCTGTTTGGAACTATCCAAAGTGCAATACTGTCTATCATTGTAGTCAGGGATTCAAATGACTGGAAAATGAGCACCGACATTGAGCTCATCTCTATATTATATTCAGCTATTATCGGAAGTGTGGTGTCTTTTTCAGTAATGACTTGGTGCATAAAAAGGAAAGGACCTGTTTTTGTTAGTTTGTTCAAGCCTGTGGGGATTGCCATTGCTGCCTTTTCGAGTGTTATCTTCCTTGGTGAAACGCTTCATATCGGCAGTGTCCTAGGCGCTGTGATAATAGGCATCGGATTTTACACAGTATTGTGGGCACAATCCAAAGAGGAAAACGCAAAAGGCCTCCAAGTTGATGGACAATCATTGCCATCTTCTGAAGCTAGTCCTCTACTGGAGACAATAACTTAG 1068 0.4457 MGVGGRLLQWTPFAAMIMVECLDVGLSTLGKAAMERGMNHFVFVVYSNALATLILLPVSFLINRTTRAPLSFALLCKFFLLGTLGITVMQNCVFTAIDYSSPTLGSAMNNLTPAITFVLAVIFGMEKLNIGSSISQIKVTGTVLSISGALLVTLYKGIPITSSRIQLSPSQPLSSLLAQTSNWAIGGAFFATASVSLALWNITQAAILKGYSSQSTILAFYCLFGTIQSAILSIIVVRDSNDWKMSTDIELISILYSAIIGSVVSFSVMTWCIKRKGPVFVSLFKPVGIAIAAFSSVIFLGETLHIGSVLGAVIIGIGFYTVLWAQSKEENAKGLQVDGQSLPSSEASPLLETIT 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01167 355 MobiDBLite consensus disorder prediction 336 355 - -
Vian1g01167 355 PANTHER WAT1-RELATED PROTEIN 12 335 IPR030184 GO:0016020|GO:0022857
Vian1g01167 355 Pfam EamA-like transporter family 187 323 IPR000620 GO:0016020
Vian1g01167 355 Pfam EamA-like transporter family 24 153 IPR000620 GO:0016020
Vian1g01167 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 328 - -
Vian1g01167 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01167 Vian-Chr1 12527189 12529217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01167 12 353 Nodulin-like Gene Family AT5G40240 43.228 2.39e-83 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01167 - - psat:127073896 486.878