Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01161 ATGTCGCTCAAGCGCCGCCCCGATGATGGCAAGACTCCAGAAGACAAGCGGCGAAAGCCGCCTCCTTTCTCCAGTGTGGTGCGTGACGTGATGAGATTACAATCACTCGGGCACTTGCTGGAGCCAATTCTTGAGCCATTGGTTCGTAAAGTGGTTAAGGAAGAAGTTGAAGCAGCCCTAAAGAGACATTTAACCTGCATGAAACAGACCTGTGGAAAGGAATTGCATACTACTGAATTAAGAAATTTGCAGCTGCAGTTTGAAAACAGCATTTCTCTGCCTGTCTTTACTGGAGGTCGGATTGAAGGAGAAGATGGTTCTAACCTAAGAATAAGTTTAGTTGATGGCCTAACTGGAGAGGTTGTCTGTACAGGACCGGAATCGATGGCTAAGGTGGAAATTGTAGTTCTTGAGGGTGATTTTGAAGAAGAAAGTGATATTTGGATGCCCGAAGAGTTCAAGAGCAATATTGTGAGAGAGAGGGAAGGAAAAAAGCCCCTTCTTACAGGAGATGTAATTTTATATCTTAAAGATGGTGTTGGTATGGTGGGTGAAATTTCGTATACAGATAATTCAAGCTGGACAAGGAGCCGCAGGTTCAGGCTTGGGGCAAGAGTTGTGGACAACTTTGATGGTGTTAGAATAAGAGAAGCAAAGACAGAATCATTTATTGTCAGAGATCACAGGGGAGAATTGTATAAGAAGCACCATCCTCCTAGTATGTCTGATGAAGTTTGGAGATTGGAAAAGATAGGCAAGGATGGAGCTTTCCACAAACGTTTGAGTCGGGAAAAGATCCTTACTGTTAGAGAGTTTCTCACGCTTCTCAATCTGGATCCAGCAAAGCTGCGCAGTATACTGGGCACTGGGATGTCTGCAAAGATGTGGGAAGTAACTGTGGAGCATGCTCGAACTTGTGTACTTGATACAACTAGGCACGTGTACTTCCCTTCTAATTCTCAACAACATGGTGTGGTCTTCAATGCTGTGGGACAAGTCACTGGACTGCTTTCTGAATGCGAGTATGTCACAGTAGATAAGCTGTCTGAAATTGAAAAGGTTGAGGCTCAAAGCACAGTTTCTAATGCATTGAGACAAGGGGAGAAATATACAACTTTTGAAGATGAAGATTCTCTCATGGATGGTTCTTCACACTTAACTAATGTACTTCACTCCCCAAGCTCTCCCAAGACTGAGGGATCAAGTGCCAACAAGCTTTTGGGTCCCCAAAAGACTGGAGGATTCAATTACCCCCAAACAAATGCCTCTTCTCCGGATATCATGTCATCCATTTATTCTGTTGGTGGAACTAGTAGCTTGGATGACTATTGCTTGCCTAGTTTCGACAACATGGGCCTCAGTTTTCCAGTCCAAGTCTCGAACTCTTTGATCTGTGACACTGATTCAATGGCTCATGCCTTTAGTGAGGAAGATCATCTGCAATTTTTTGATACTGATATTCAATCTCACGTTGAGGCAGATTTACAGAGTGCTGTTGATAGCTTCATGCTCGCACGTTCTACGGCCAATGGTGGTGCGCAGAGGAGATGGAGAAAAGTATGCAACGTCCTAAAGTGGTTCATGGTTAGGAAACGAGGAAACCAAATACAGGTAAGGTTGTGA 1623 0.4405 MSLKRRPDDGKTPEDKRRKPPPFSSVVRDVMRLQSLGHLLEPILEPLVRKVVKEEVEAALKRHLTCMKQTCGKELHTTELRNLQLQFENSISLPVFTGGRIEGEDGSNLRISLVDGLTGEVVCTGPESMAKVEIVVLEGDFEEESDIWMPEEFKSNIVREREGKKPLLTGDVILYLKDGVGMVGEISYTDNSSWTRSRRFRLGARVVDNFDGVRIREAKTESFIVRDHRGELYKKHHPPSMSDEVWRLEKIGKDGAFHKRLSREKILTVREFLTLLNLDPAKLRSILGTGMSAKMWEVTVEHARTCVLDTTRHVYFPSNSQQHGVVFNAVGQVTGLLSECEYVTVDKLSEIEKVEAQSTVSNALRQGEKYTTFEDEDSLMDGSSHLTNVLHSPSSPKTEGSSANKLLGPQKTGGFNYPQTNASSPDIMSSIYSVGGTSSLDDYCLPSFDNMGLSFPVQVSNSLICDTDSMAHAFSEEDHLQFFDTDIQSHVEADLQSAVDSFMLARSTANGGAQRRWRKVCNVLKWFMVRKRGNQIQVRL 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01161 540 MobiDBLite consensus disorder prediction 384 404 - -
Vian1g01161 540 PANTHER OS02G0177800 PROTEIN 16 445 IPR012416 GO:0005516
Vian1g01161 540 MobiDBLite consensus disorder prediction 1 23 - -
Vian1g01161 540 Pfam Calmodulin binding protein central domain 241 306 IPR046830 -
Vian1g01161 540 Pfam Calmodulin binding protein C-terminal domain 313 371 IPR046829 -
Vian1g01161 540 Pfam Calmodulin binding protein-like N-terminal domain 83 228 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01161 Vian-Chr1 12469671 12473866 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01161 1 353 Calmodulin-binding Proteins AT5G62570 60.833 1.06e-155 447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01161 1 12469671 12473866 Vian1g01161 1 12469671 12473866 ECH