Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01128 ATGCAGCAGAGTGATCAGACGGTGTTGAGCTTGAGGCCCGGCGGTGGAAAAGGCAGCAGGCTCCTCGGCCCTCGATTCGACTCCTCATCCTCGTCTTCTGCTTCCCCTGCTTTTGGCTCCTTTTCTGCTGATCTTCCTCTCCTGCGTCCTCATGGCGGCTCTCCCTCTCCCTTCTCTATCAAGGCTGGAGATTCCCGGTTTGAAGGTCGTGAGCGTGGTGTTGAGATCCTTGATGATGTTTTGAAGATCAGACAAGAAATTGTAGCTGAACTTTTTGGTGAAGATCAAAGTTGGGCCCGCCCAGAAAGTAACCCCTCAAATCAATTTCAAAATCGATATTCTGAGCCAGATAATCGTGATTGGCGTGGACGATCTGGCCAACCTTTTGGTAATGCAGATGAGAGGTCTTGGGATAATCTCAAGGAGAATAGGGAGTTTGGAAATAATCGTCAAGAGCAACTGAATTCTCAGTTTTCAAGGGCACAAATATCTTCTAACCAAGGGGGGGGACCTACTCCAACACTAGTCAAGGCTGAGGTGCCATGGTCAGCTAGAAGGGGAACTCTCTCTGATAAAGATCGTGTCTTAAAGACAGTTAAAGGAATACTAAATAAGTTGACTCCTGAGAAATTTGATCTCTTGAAGGGTCAGTTGATTGATTCTGGCATTACATCTGCCGACATATTGAAGGGAGTTATTTCACTAATATTTGATAAGGCAGTGCTAGAACCAACATTTTGCCCAATGTATGCCCAGCTATGTTCTGATCTTAATGAAAAGCTGCCTCCATTCCCATCTGATGAGCCTGGTGGGAAGGAAATCACTTTTAAGAGAGTGCTCTTGAATAACTGCCAGGAGGCTTTTGAAGGTGCAGATAACCTGAGGGAAGAAGTGAGACAGATGACTGCTCCTGAGCAGGAGATGGAGCGAAGGGATAAGGACAGACTTGTCAAGATTCGAACCCTTGGAAACATTCGTTTAATTGGTGAGCTATTGAAGCAAAAAATGGTTCCCGAAAAGATTGTTCATCACATTGTTCAGGAGCTTTTAGGTCCGCCTGACAGCAAGGTATGTCCAGCTGAGGAAAATGTTGAAGCTATATGTCAATTTTTCAACACTATTGGTAAGCAGCTTGATGAAAGCCAAAAATCGAGGCGTATTAATGATATGTACTTCAGTCGTTTGAAAGAATTGAGCACCAATCCCCAACTTGTTCCACGGCTGCGGTTTATGGTTCGTGATGTTCTAGATTTGCGTTCTAATAACTGGATTCCTAGACGTGAAGAGGTGAAAGCCAAAACCATCACTGAAATTCATTCAGAGGCAGAGAAAAATCTTGGATTGCGTCCAGGTGCCACTGCAAGTATGAGAAATAGCCGTGTAACTTCTGGTGTTCAAGGAAATGTCAGTCAGGGAGGATTTCCAATTGCCCGACCTGGTACTGGCGGTATGATGCCTGGGATGCCGGGGACAAGGAGGATTTCTGGAATTGATAATGACAACTGGGAGGTTCCCAGGACAAGATCAATGCCGAGAGGAGACATGTCAGGCATGCAAGCTGGAGGGCGTGGTCAGTCTCCTTTCATATCTAAGACACCAACTGTTAGCTCAAAGTTACTACCTCAAGGTAGTGGTGGTACTATAAGTGGGAGAAGCAGTGCCCTGGTGCATGGAGGTGGTGGTGCTCCTTCTGCTCGTCCATCAAATGTTGGTTTGAGTACCGAGCCCACACCTCAAATGCCTTCACCTGTTAAAGCTGTTTCTGCCATACCCTCTGAGAAGCCACAAGCTTCAGCTCCAAAATTGAATGTTGACGAACTTCAGCGTAAAACTAGTTCTCTTCTGGAGGAATATTTCAGTGTCCGGCTTTTGGACGAGGCATTGCAGTGTGTGGAGGAACTAAAAGCTCCGGCTTATCATCCCGAAGTTGTGAAGGAAGCCATTTCCATTGGACTAGATAAAAGTCCGCCATGTGTTGAACCTGTTGGCAAACTTCTTGAGTATCTGTTCGTGAAGAAGATTCTTTCAGCCAGAGACATAGGAACTGGGTGCATGTTATTTGCTTCTCTGCTGGATGATATCGGCATAGACTTACCTAAAGCACCAAATAATTTTGGTGAGATAGTAGGGAAACTAGTTTTGGCTGGGGCTTTGGATTTTAAGGTGGTGAGAGACGTCCTGAAGAAGGTGGAGGATGACCGGTTCCAGAAAGCAATATTTTCTGCTGCATTGCAGGTAATTAGCTCTGCATCTGGGCAAGCTGTGTTGGATTCACAAGCATCTGATATTGAGGCCTGTCAGAGTCTGTTCAACTGA 2316 0.4581 MQQSDQTVLSLRPGGGKGSRLLGPRFDSSSSSSASPAFGSFSADLPLLRPHGGSPSPFSIKAGDSRFEGRERGVEILDDVLKIRQEIVAELFGEDQSWARPESNPSNQFQNRYSEPDNRDWRGRSGQPFGNADERSWDNLKENREFGNNRQEQLNSQFSRAQISSNQGGGPTPTLVKAEVPWSARRGTLSDKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYAQLCSDLNEKLPPFPSDEPGGKEITFKRVLLNNCQEAFEGADNLREEVRQMTAPEQEMERRDKDRLVKIRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPPDSKVCPAEENVEAICQFFNTIGKQLDESQKSRRINDMYFSRLKELSTNPQLVPRLRFMVRDVLDLRSNNWIPRREEVKAKTITEIHSEAEKNLGLRPGATASMRNSRVTSGVQGNVSQGGFPIARPGTGGMMPGMPGTRRISGIDNDNWEVPRTRSMPRGDMSGMQAGGRGQSPFISKTPTVSSKLLPQGSGGTISGRSSALVHGGGGAPSARPSNVGLSTEPTPQMPSPVKAVSAIPSEKPQASAPKLNVDELQRKTSSLLEEYFSVRLLDEALQCVEELKAPAYHPEVVKEAISIGLDKSPPCVEPVGKLLEYLFVKKILSARDIGTGCMLFASLLDDIGIDLPKAPNNFGEIVGKLVLAGALDFKVVRDVLKKVEDDRFQKAIFSAALQVISSASGQAVLDSQASDIEACQSLFN 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01128 771 MobiDBLite consensus disorder prediction 523 551 - -
Vian1g01128 771 MobiDBLite consensus disorder prediction 463 585 - -
Vian1g01128 771 MobiDBLite consensus disorder prediction 99 114 - -
Vian1g01128 771 FunFam Eukaryotic translation initiation factor isoform 4G-2 600 761 - -
Vian1g01128 771 Gene3D - 188 423 - -
Vian1g01128 771 MobiDBLite consensus disorder prediction 1 64 - -
Vian1g01128 771 MobiDBLite consensus disorder prediction 24 39 - -
Vian1g01128 771 MobiDBLite consensus disorder prediction 567 581 - -
Vian1g01128 771 Gene3D - 599 766 - -
Vian1g01128 771 Pfam MIF4G domain 196 422 IPR003890 GO:0003723|GO:0005515
Vian1g01128 771 FunFam Eukaryotic translation initiation factor isoform 4G-2 187 423 - -
Vian1g01128 771 ProSiteProfiles MI domain profile. 606 728 IPR003891 -
Vian1g01128 771 SUPERFAMILY ARM repeat 190 424 IPR016024 -
Vian1g01128 771 SMART ma3_7 607 719 IPR003891 -
Vian1g01128 771 SMART if4_15 196 422 IPR003890 GO:0003723|GO:0005515
Vian1g01128 771 MobiDBLite consensus disorder prediction 98 135 - -
Vian1g01128 771 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 66 755 IPR045208 GO:0003743
Vian1g01128 771 SUPERFAMILY ARM repeat 600 758 IPR016024 -
Vian1g01128 771 Pfam MA3 domain 607 719 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01128 Vian-Chr1 12116587 12122009 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01128 1 769 Eukaryotic Initiation Factors Gene Family AT5G57870 64.861 0.0 956
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01128 K03260 - gmx:100781275 1353.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01128 1 12116587 12122009 Vian1g01128 1 12116587 12122009 ECH