Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01126 ATGCCGACGCGTTGTGAAATATGCTGCGAGATAATGATCGCGATCTTGCTTCCTCCAATCGGAGTTTGCTTTCGCCACGGTTGTTGCAGCGTTGAATTCATCATCTGTTTGCTCCTCACAATTCTAGGTTATATTCCTGGCATCATTTATGCTCTCTATGCCATTATCTTCGTTGATCGTGACCAGTACTTTGATGAATACAGGCGTCCTCTCTATTCGCAATACTGA 228 0.443 MPTRCEICCEIMIAILLPPIGVCFRHGCCSVEFIICLLLTILGYIPGIIYALYAIIFVDRDQYFDEYRRPLYSQY 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01126 75 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 4 59 IPR000612 GO:0016020
Vian1g01126 75 Pfam Proteolipid membrane potential modulator 8 55 IPR000612 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01126 Vian-Chr1 12100860 12101182 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01126 1 72 RCI2 Gene Family AT4G28088 77.778 9.26e-40 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01126 - - gmx:100306426 160.614