Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01115 ATGGCTGAGCGCCGCAGTCCCCAAGCTCTCCCAGACCCGAACCCCGAACCAAATGATTCCGACAGAAAGCCGCACGACGCCAACCAGACACAACGACTCACCGAATCGCCCTCCCCTGCCGAGTTGCAGCGCCGCGAGTTACGAAGTTTCGGTGAGCGTCGCACGGAGTCCAATTTAGAAACCCTAGGCGGTGCCGTTACCTCTTCGGTGCAAACCCTTGCTGTGCAACACCATCGCAGTGACGATTTGCACGGAAGCTCTGTTGCGTCGAATTCCAGTGGCAAAGCCGAAAGTAAGGAGACAGATGCACCTCCTGAAAAAGAAATTATTCAAGGAGAAGCACAACCACTTCCAACTCAGACAAATCGACTTCAGCTGTCTGTGTGTTCAACTCCATTGTCTGAACTGCCACCAACTTCTGTTATACATTCTTCAACATCTGTTTCTAGTCCAACTGTACCAAAACAAAAATTATCTTCTCCAAAGGTCAATAATGCACGTTTGCCAGAAGTAGATAAGAAAAGTTCCTCTGGTGGCAAAACATTATCTGCTGTTTCTGTTGCAAGGTCATCTGCATCTGATGGATATAACTGGCGGAAGTATGGTCAGAAGCAAGTAAAGAGTCCTACAGGTTCTCGAAGCTATTACAGGTGTACCCATTCAGACTGTTGTGCTAAGAAGATTGAATGTTGTGATCATTCAGGTCATGTGATAGAGATTGTTTATAAAAGTGAGCACAGTCATGATCCCCCACGGAAGATTAATTCTCTTAGGGAAAATAAGATTCTGTCTGCCAGCCAACCAATTGTAGAAAAAAGTATTCCAGACCAGCCTGTCAGACTTATGAAGGATCCTGATCCATCCATTTCCTCAAAAGAATCTCTACAAGAAGCACCCTGCAGCACTGATAAGAAACGGCCAAACTCGTCTAGTATGAGTAATGGTAAAGTTATTTTGAAAGAGGAACCTGTAAATGAGCCAGAGCCGAAAAAAAGAATGAAGAAAGGTGACTTAACAGACATGGATTCTCCTGTAAAACCTGGAAAGAAGCCCAAGTTTGTCATACATGCAGCAGGGGATGTGGGGATATCTGGTGATGGTTATCGATGGCGGAAGTATGGGCAGAAAATGGTAAAGGGAAATCTGCATCCCAGGAACTACTACAGATGCACTTCTGCTGGATGCCCTGTCAGAAAACACATTGAATCTGCCGTAAATAACTCAGATGCCGTGATTATAACATACAAGGGAGTACATGACCATGACATGCCTGTGCCCAAGAAACGACATGGGCCACCAAGTGCTCCTCTTGTGGCAGCTGCAGCACCCGCGTCCATGAACAGTTTGCAGGTGAAGAAACCCGATTCCCCACAGAAGAAGAAAGTTTCTACTCAATGGTCGGTGGACACAGAAGGAGAACTAACTGGGGAAGCCCTTGAGCTTGGGGGGGAGAAAGCAATGGAATCAGCTCGAACGCTTCTGAGCATAGGTTTTGAAATTAAGCCTTGCTGA 1512 0.4643 MAERRSPQALPDPNPEPNDSDRKPHDANQTQRLTESPSPAELQRRELRSFGERRTESNLETLGGAVTSSVQTLAVQHHRSDDLHGSSVASNSSGKAESKETDAPPEKEIIQGEAQPLPTQTNRLQLSVCSTPLSELPPTSVIHSSTSVSSPTVPKQKLSSPKVNNARLPEVDKKSSSGGKTLSAVSVARSSASDGYNWRKYGQKQVKSPTGSRSYYRCTHSDCCAKKIECCDHSGHVIEIVYKSEHSHDPPRKINSLRENKILSASQPIVEKSIPDQPVRLMKDPDPSISSKESLQEAPCSTDKKRPNSSSMSNGKVILKEEPVNEPEPKKRMKKGDLTDMDSPVKPGKKPKFVIHAAGDVGISGDGYRWRKYGQKMVKGNLHPRNYYRCTSAGCPVRKHIESAVNNSDAVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPASMNSLQVKKPDSPQKKKVSTQWSVDTEGELTGEALELGGEKAMESARTLLSIGFEIKPC 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01115 503 Gene3D WRKY domain 178 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian1g01115 503 Gene3D WRKY domain 350 425 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian1g01115 503 FunFam WRKY transcription factor 353 425 - -
Vian1g01115 503 SUPERFAMILY WRKY DNA-binding domain 190 251 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian1g01115 503 MobiDBLite consensus disorder prediction 114 163 - -
Vian1g01115 503 MobiDBLite consensus disorder prediction 267 351 - -
Vian1g01115 503 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 134 451 IPR044810 GO:0003700
Vian1g01115 503 MobiDBLite consensus disorder prediction 1 184 - -
Vian1g01115 503 SUPERFAMILY WRKY DNA-binding domain 360 424 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian1g01115 503 Pfam WRKY DNA -binding domain 366 421 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian1g01115 503 Pfam WRKY DNA -binding domain 194 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian1g01115 503 MobiDBLite consensus disorder prediction 39 55 - -
Vian1g01115 503 ProSiteProfiles WRKY domain profile. 187 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian1g01115 503 SMART WRKY_cls 364 423 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian1g01115 503 SMART WRKY_cls 192 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian1g01115 503 MobiDBLite consensus disorder prediction 289 316 - -
Vian1g01115 503 ProSiteProfiles WRKY domain profile. 359 424 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian1g01115 503 MobiDBLite consensus disorder prediction 60 76 - -
Vian1g01115 503 MobiDBLite consensus disorder prediction 321 349 - -
Vian1g01115 503 MobiDBLite consensus disorder prediction 447 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01115 Vian-Chr1 11999786 12008583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01115 148 503 WRKY Transcription Factor Family AT4G30935 57.660 4.47e-131 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vian1g01115 WRKY 1.2e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01115 - - gmx:100127377 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01115 1 11999786 12008583 Vian1g01115 1 11999786 12008583 ECH