Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian1g01114 | ATGAAGGAGAAAAAGAGAGAAAAAGAGAGAAGGGTGAATATGTCTGACGAAGAGCATCACTTCGATTCTCACGCAGATGCAGGAGCGTCCAAGACGTATCCTCAGCAGGCTGGTACCATTCGCAAGAACGGTTACATCGTCATTAAATCTAGGCCTTGCAAGGTCGTAGAAGTTTCTACATCAAAGACAGGCAAGCATGGACATGCAAAATGCCACTTTGTTGCCATTGATATTTTTAACGGGAAAAAGCTTGAAGATATCGTTCCATCTTCCCACAACTGTGATGTTCCACACGTGAACCGCACTGACTATCAGCTGATTGATATATCTGAAGATGGCTTTGTGAGTCTGTTGACTGATAACGGAAATACCAAGGATGATCTTAGGCTTCCCACTGATGACTCGCTGCTTTCTCAGATTAAAGAAGGTTTTGCTGAAGGAAAAGATCTTGTGGTTTCTGTCATGTCTGCTATGGGAGAAGAGCAGATCTGTGCCTTGAAGGACATCGGTCCCAAAAATTAA | 522 | 0.4349 | MKEKKREKERRVNMSDEEHHFDSHADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTDDSLLSQIKEGFAEGKDLVVSVMSAMGEEQICALKDIGPKN | 173 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian1g01114 | 173 | Pfam | Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold | 98 | 167 | IPR020189 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Vian1g01114 | 173 | Gene3D | - | 14 | 98 | IPR014722 | - | |
Vian1g01114 | 173 | FunFam | Eukaryotic translation initiation factor 5A | 99 | 171 | - | - | |
Vian1g01114 | 173 | Gene3D | - | 99 | 172 | IPR012340 | - | |
Vian1g01114 | 173 | SUPERFAMILY | Nucleic acid-binding proteins | 99 | 169 | IPR012340 | - | |
Vian1g01114 | 173 | CDD | S1_eIF5A | 99 | 169 | - | - | |
Vian1g01114 | 173 | PIRSF | Transl_init_eIF5A | 14 | 170 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Vian1g01114 | 173 | FunFam | Eukaryotic translation initiation factor 5A | 14 | 98 | - | - | |
Vian1g01114 | 173 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Vian1g01114 | 173 | SMART | eIF_5a_2 | 98 | 167 | IPR020189 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Vian1g01114 | 173 | SUPERFAMILY | Translation proteins SH3-like domain | 28 | 106 | IPR008991 | - | |
Vian1g01114 | 173 | ProSitePatterns | Eukaryotic initiation factor 5A hypusine signature. | 63 | 70 | IPR019769 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Vian1g01114 | 173 | PANTHER | TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER | 14 | 170 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Vian1g01114 | 173 | NCBIfam | translation initiation factor IF-5A | 30 | 166 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Vian1g01114 | 173 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian1g01114 | Vian-Chr1 | 11989331 | 11992165 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian1g01114 | 14 | 172 | Eukaryotic Initiation Factors Gene Family | AT1G13950 | 89.937 | 1.21e-104 | 295 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian1g01114 | K03263 | - | egr:104436092 | 317.39 |