LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian1g01093	ATGGCATGCAAGTTTGCAAATGAGGAAGAACCATGCACTGTTGCTGGGGAATGTAGTCAAGCCTTTGCACCAAAAACTAATGCTAACCAGAATATAAAAGTGGATCATAAAAGGAAAGAACGCTGTGAGGCTGAGGAAATAGAAGAAGATGACAAAGAGAACGATGAACCCTCCAATCAGAAGAAAACTCGTTTAGTTTGGGATACTGAGTTGCACAACAAATTTCTTGCTGCCATTAATCAGCTGGGAATTGACACTCCTAATAAATTCAGACTCGGTCTCAAAAAGCCCAATCCTTACCACCGTATGGGTTCAGTTGATTGCTTTCGCACTTCATCTGAATCAGGAGCTATGTTGAGCACCACATCACCTTCATATGCATATGCACCTGGTGGAAGGTTTAGTGTGTTAAACTCTCCATCCTGCTTGAACACGAGAGGAATGAACTCATCTGCAACTGTTCAGGCTTCTCAGTCTCGAAACATTAACAGCAGCTCCATAAAAACACATGGAAACATGCACTCGTCTATGTTTTCTGCAAATCAAACCTCAAGCTTATTGCAAGGCATTCCAACATCAATGGAGGCTAACCTGTTTAAGCCGAACAACTCAGCAGCTGGTATTAGGAGGTTTAACCCACTTGATCACTCAGCTGCACTTAAAGATTTCTCTAGTTTCTCGGAAAATATAGCCACTGTTAGAAATGCAGCTAATATATCTCTTCCTGGTCTCTCCAATAATCATTTACTTTTTCAAGGAATTTCCCAACTTAAACATCATTCTGAAGCATTCAGAAATCATTCATCTTTTGGAGCTGCTGCTGTGAAAACACAATCTTTTGATCCAAACTCCTTTGGTTATTCTAAAATGGGGGGTGATTATAGTAATAAAAGGTGGCAGGAAGCAGCTCCGATATCTACCTGTCCTTCAAATACTTCTGCTGTCAGTAACGTTTTCAATAATGATCAACTACTTCAGCATAACTTTAAGTTGTCCTCATCCAATTTTTGCAGTAGGAACAGTCCAGTTGGTTTTTCTTCAAGTGTTCCTTTGGAGGATGATGTCCTAGGTGAGATGCTGCATCAAGAAGGCTTACTTGGGAATATCTTATTAGCTTCGTGTTACACCCAGCATAACCAGGGAGGTTGCAGTAAAGACACAAGTCAAACCTTCAATTCCATAAATCCTGTCATTTCTTCTAATGGAGGCACTAGTTCCTTGGGACACAGCTATGAACAAAATAGTACAGTTGACAATAACATAATTGATGCATCTTTGGTTGGCCAAATGAATGGGGTAAATCCATCAATCACAGTGTGTAGTGAAGGTGAGAATTTCTATTCAATGAAGTCAAATGATGCGTATGTATTGCAGAGCATGAAGTCCGGTGAAGGACTCCTGCAGAATAGTTTGGAGTCCTTGGATGACATATTGAATGAAATAGACGAACAGGATCTAAATGCGATTATGTTGATGAATGAAGACCTATAG	1491	0.4017	MACKFANEEEPCTVAGECSQAFAPKTNANQNIKVDHKRKERCEAEEIEEDDKENDEPSNQKKTRLVWDTELHNKFLAAINQLGIDTPNKFRLGLKKPNPYHRMGSVDCFRTSSESGAMLSTTSPSYAYAPGGRFSVLNSPSCLNTRGMNSSATVQASQSRNINSSSIKTHGNMHSSMFSANQTSSLLQGIPTSMEANLFKPNNSAAGIRRFNPLDHSAALKDFSSFSENIATVRNAANISLPGLSNNHLLFQGISQLKHHSEAFRNHSSFGAAAVKTQSFDPNSFGYSKMGGDYSNKRWQEAAPISTCPSNTSAVSNVFNNDQLLQHNFKLSSSNFCSRNSPVGFSSSVPLEDDVLGEMLHQEGLLGNILLASCYTQHNQGGCSKDTSQTFNSINPVISSNGGTSSLGHSYEQNSTVDNNIIDASLVGQMNGVNPSITVCSEGENFYSMKSNDAYVLQSMKSGEGLLQNSLESLDDILNEIDEQDLNAIMLMNEDL	496

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian1g01093	496	MobiDBLite	consensus disorder prediction	31	45	-	-
	Vian1g01093	496	Gene3D	-	58	113	-	-
	Vian1g01093	496	MobiDBLite	consensus disorder prediction	25	61	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vian1g01093	Vian-Chr1	11753222	11755203	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vian1g01093	33	90	Response Regulator Gene Family	AT4G31920	51.667	3.54e-09	57.4

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vian1g01093	-		K14491	vun:114177568	838.565