Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01072 ATGTCTGGCATGCTTCCAGGAGTTGAAAGTGCTCGAAGAAGACGATTGCATAGCAACAGTTCTTCTCGTGATTTCATCAGTGGTTCCTCTCTGTGTTTGTATGCTAACAGGAAACTCCGATCTCCTCCTTCTTCCTCTCTATTGGAAAGAAACACGGTGAATCAGGCCGACCCAGATGAAAATCTGGGAGTAGCAGCACTGGAAGCCAAGCGCAGATTAGATCAGAGCTTCAAGAAACGACCATTACCTGCCGCAGAACACAAATTGTCCAAGCTGCAATCAGACAGCCTTAAATGGCAGCAAGACTCTTTCCACCAGGTCTTAAACTTGATGGGTCTCCACAAAGAAGGCATCGTGGCTGAATCTGAGGTCTCTGCCTTCAGAATTCACTTGCTAGACACCCTCATTGTTTCTCCTCCAGAACAAGAACACCCTGTTATACTAAGAGACAAGCTTCTCTTTCTCCAGGAACTTCTGTATGCGAAGTGCATTTCTGAAGAGGAATACCATTCTTCTAAGAGGCCATTGCTTCAGAGGCTGGCGGCTCAAGGAGCTCAGATTGAAGCCAGGGATGTGATAGTGGCAAAGACTAAGGAGTCAAAAGAGAATTTGGAAGAAGAGTGGTCGGTGATTGACTTGAAGGATGAGAAATGCTCTGTGAACAAAGAGAATTTGGGTTGTAAGAGCAGATCTAATCAGGGATCATCGATGAAGCAGATTAAAGGAGCTGCCTCGGTTTTTGGCTTTGGCAGAGCTGGGAAAAATGGGACAGAAAAGAGCATATTTGATTCACCTTCTTTGTCTGCAAAAAATGAAAACCCTTTCTGGGATGGTCAAACAAAGGGAGCACAGAGTGAAGGAGGTTCAATTCTTATGGAGGAAAGTGAGCCTCCAGAAGCAGTTAAGGAGAGTAGTGGTTTGGAGAAGTTAAAGAGGAAACCATTTAGGTCTTTGTTTCATAAGGAGCAAAGAGAGACACATGGTGGTGGTGGTGCTGAGCAAGATCAAAGATCAGGGAAATCAGTCAAAAAGCAATGGGGATTTGAAGGATTCAAGAAATGGAAGAGAAATGAGTCAGAAGATGAGACATGTTCTTTGTCACATAATGAAAGGTCAGATAATGAGGCCTTTTCAGGTCCCTTTGCAAAGGGATTTGGGGAGGGACCTGACACCAAGTTAATGAAGAAGAAGTTGCATTCTGATGGTTCTCCATCTGATTTTTTCATAGATAAGGTTTTGGGAGACAAGATAAAAAAGGAGTTGTCTAGAATTCAAACAGAACTCAGCAGCACAAACCCACATCTTAAATTTTCGAATGATCAGATTGAAGCAATTTCAACCAGAATTCCAGTGGACAAGGCTGAGTTGAAAAACTACTTTCCCAAATCTTGGTGTGACCGATATGGTGATGTTGTGCTGGACGTTGTGAAGAAAGAATTCAAAGACCATGTTGCGGAAATGGAGAACATGCGCAACGTTGCTAGAGAACGACACAGCAACTCTAGGCGCTGGACAACAACAACATTTGACAATGACGAAAACATTCACCCAAACCCTTTTGGGCACCGTGAAAACTCAGTTCGTTGCAGTAACATCAATCCATTTTCTCATGGTTTTGCTTAG 1623 0.435 MSGMLPGVESARRRRLHSNSSSRDFISGSSLCLYANRKLRSPPSSSLLERNTVNQADPDENLGVAALEAKRRLDQSFKKRPLPAAEHKLSKLQSDSLKWQQDSFHQVLNLMGLHKEGIVAESEVSAFRIHLLDTLIVSPPEQEHPVILRDKLLFLQELLYAKCISEEEYHSSKRPLLQRLAAQGAQIEARDVIVAKTKESKENLEEEWSVIDLKDEKCSVNKENLGCKSRSNQGSSMKQIKGAASVFGFGRAGKNGTEKSIFDSPSLSAKNENPFWDGQTKGAQSEGGSILMEESEPPEAVKESSGLEKLKRKPFRSLFHKEQRETHGGGGAEQDQRSGKSVKKQWGFEGFKKWKRNESEDETCSLSHNERSDNEAFSGPFAKGFGEGPDTKLMKKKLHSDGSPSDFFIDKVLGDKIKKELSRIQTELSSTNPHLKFSNDQIEAISTRIPVDKAELKNYFPKSWCDRYGDVVLDVVKKEFKDHVAEMENMRNVARERHSNSRRWTTTTFDNDENIHPNPFGHRENSVRCSNINPFSHGFA 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01072 540 Coils Coil 477 497 - -
Vian1g01072 540 MobiDBLite consensus disorder prediction 365 385 - -
Vian1g01072 540 MobiDBLite consensus disorder prediction 321 342 - -
Vian1g01072 540 MobiDBLite consensus disorder prediction 261 286 - -
Vian1g01072 540 PANTHER OS09G0556800 PROTEIN 73 529 - -
Vian1g01072 540 MobiDBLite consensus disorder prediction 1 24 - -
Vian1g01072 540 MobiDBLite consensus disorder prediction 261 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01072 Vian-Chr1 11449264 11453036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01072 1 81 C3H Transcription Factor Family AT2G15580 37.755 4.01e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01072 - - gmx:100811675 801.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01072 1 11449264 11453036 Vian1g01072 1 11449264 11453036 ECH