Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01064 ATGGGATACCAAAAGCCTGCATGGTTGGAAGCTCTTTACACACAAAAGTTCTTTGTGGGGTGCTCTTACCATGAGAACGCTAAAAAGAATGAGAAGAACGTCTGCTGCTTAGATTGTTGCACCAGTATTTGCCCTCACTGCTTACCATCTCATCGCTTCCACAGACTGCTTCAGGTTCGCCGCTACGTTTACCATGACGTTGTTAGGCTTGAAGATCTTCAGAAACTCATAGATTGCTCCAACGTTCAGGCTTATACCATCAATAGTGCCAAGGTGGTGTTCATCAAGAAGAGACCTCAAAACCGGCAATTCAAAGGATCAGGAAACTACTGCACCTCCTGTGATAGAAGTCTTCAAGAGCCTTTCATTCATTGCTCTCTTGGATGCAAGGTTGATTTTGTGCTGAAACACTACAAGGATCTGTCTCCATACTTGAGGACATGCAACTCCCTACAACTAAGTCCTGATTTTTTGATCCCACAAGAGACGGTGGATGAAGAGGTGACTCGTTCAACGGTTGTGGATTGTGATGAGCCAATGAGTTCGTGTTCAGGGTCATCAGGGTCAGAGAACAACATGAGCATGTCTTGCACAGAGATTGTAAGGAAGAGGAGGAGTGGATGGAGCACTGTGTGTGCAAAATTCATGGCCAACAGCAATAACAAAGTTTCTGATGAAGACATGGCCACCAGCATGAGTAGAAGAAAAGGGATCCCTCATAGATCCCCACTGTGTTAG 738 0.4526 MGYQKPAWLEALYTQKFFVGCSYHENAKKNEKNVCCLDCCTSICPHCLPSHRFHRLLQVRRYVYHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPFIHCSLGCKVDFVLKHYKDLSPYLRTCNSLQLSPDFLIPQETVDEEVTRSTVVDCDEPMSSCSGSSGSENNMSMSCTEIVRKRRSGWSTVCAKFMANSNNKVSDEDMATSMSRRKGIPHRSPLC 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01064 245 MobiDBLite consensus disorder prediction 226 245 - -
Vian1g01064 245 Pfam PLATZ transcription factor 60 131 IPR006734 -
Vian1g01064 245 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 4 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01064 Vian-Chr1 11357077 11358201 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vian1g01064 PLATZ 4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01064 - - gmx:100785737 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01064 1 11357077 11358201 Vian1g01064 1 11357077 11358201 ECH