Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01059 ATGTTGAGAGTGAAGGGAGGGAAAAGGCCACCTTGGGTGGGACTTGGAGCTGCCGTGTGGGTTCAGATTTGTTCAGGAAATGGCTACACTTTCCCTCTCTACTCTCATTCCTTGAAATCCGTTTTGGGTTTCAACCAGAGTCAGATTACTCTGCTTGGTGTTGCCAATGATATTGGTGAGAACCTTGGCATTCTTCCTGGTCTCGCCTGCAACAAGTTCCCCCCTTGGCTCATTCTTCTCATTGGTGGTCTCTTATCATTCCTTGGTTTTGGTGTTCTCTGGCTCGCTATTTCTAAAACATTTGACTGCGTTCCTTTCATTGTGCTATGGCTTGCACTTGCTGTAGCTACCAACAGCTGTGCATGGTTATCTACTGCTATTCTAGTCACCAACATGAGAAATTTCCCTGTCAGTAGAGGCACAGTTGCAGGAGTCCTGAAAGGTTATTCGGGGCTCAGTGCTGCAGTTTTTACGGAAATTTACAGCGTGGGTTTTCATAATTCTTCACCCAACTTCCTGTTGTTCCTTGCCATTGGTATTCCTGCTTTATGCTTCAGTACAATGTTTCTTGTTCGGCCTTGCACTCCGGCTTCCGGTGAAGATTCTTCTGAAAACAGTCATTTTTTGTTCATCCAAGTTGCTAGTGTAGCCTTGGGTTTATACTTACTTGCAACAACAATACTCGACAACTTTGTCCCCATGAATTATACAGTATCATTTGTTATGTTGGCTGTGATGATTCTCCTTCTCTTGGCTCCCCTTGCAATCCCTATAAAGATGACACTGTGCCCCAGAAAAGCATCTGCATCAGAAACACCAGAGCAACATGTTGGATCTTCCGACTTTCTGGTTCAAGATGGCAAGGTGGACAACACAGAACCCTTGCTATCATCTTCATCAACCAGTGGCCTTGGAAGTTTTAATGATGTGGATGGTTCAGCTGAGGTGGCCATGCTTCTCGCTGAGGGTGAGGGGGCAGTGAGGAAGAAGAGAAGGCCCAAGAGAGGGGAAGATTTTAAGTTTACCGAGGCTCTCGTTAAGGCAGATTTCTGGCTGCTGTTTTTTGTTTACTTTGTTGGGGTTGGAACAGGGGTTAGCGTTCTGAATAATTTGGCTCAGATTGGCATTGCACAAGGTATGGAAGATACCACTGTTTTGCTGTCATTATTCAGCTTTTTCAATTTTGTGGGTCGGCTAGGTGGAGGAGTTGTTTCAGAACATTTTGTCAGGTAA 1233 0.4517 MLRVKGGKRPPWVGLGAAVWVQICSGNGYTFPLYSHSLKSVLGFNQSQITLLGVANDIGENLGILPGLACNKFPPWLILLIGGLLSFLGFGVLWLAISKTFDCVPFIVLWLALAVATNSCAWLSTAILVTNMRNFPVSRGTVAGVLKGYSGLSAAVFTEIYSVGFHNSSPNFLLFLAIGIPALCFSTMFLVRPCTPASGEDSSENSHFLFIQVASVALGLYLLATTILDNFVPMNYTVSFVMLAVMILLLLAPLAIPIKMTLCPRKASASETPEQHVGSSDFLVQDGKVDNTEPLLSSSSTSGLGSFNDVDGSAEVAMLLAEGEGAVRKKRRPKRGEDFKFTEALVKADFWLLFFVYFVGVGTGVSVLNNLAQIGIAQGMEDTTVLLSLFSFFNFVGRLGGGVVSEHFVR 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01059 410 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 409 - -
Vian1g01059 410 SUPERFAMILY MFS general substrate transporter 11 195 IPR036259 -
Vian1g01059 410 SUPERFAMILY MFS general substrate transporter 216 408 IPR036259 -
Vian1g01059 410 Pfam Nodulin-like 11 258 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01059 Vian-Chr1 11308861 11310492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g01059 2 410 Nodulin-like Gene Family AT1G80530 56.829 2.49e-163 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01059 - - gmx:100808992 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g01059 1 11308861 11310492 Vian1g01059 1 11308861 11310492 ECH